Protein–RNA interactions for Protein: Q8JZS7

Hmgcll1, 3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic, mousemouse

Predictions only

Length 343 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgcll1Q8JZS7 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC25.52■■□□□ 1.68
Hmgcll1Q8JZS7 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Hmgcll1Q8JZS7 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC25.52■■□□□ 1.68
Hmgcll1Q8JZS7 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
Hmgcll1Q8JZS7 Zxda-201ENSMUST00000117281 2621 ntBASIC25.5■■□□□ 1.67
Hmgcll1Q8JZS7 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Hmgcll1Q8JZS7 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC25.49■■□□□ 1.67
Hmgcll1Q8JZS7 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC25.49■■□□□ 1.67
Hmgcll1Q8JZS7 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC25.49■■□□□ 1.67
Hmgcll1Q8JZS7 Nkain2-201ENSMUST00000092602 558 ntBASIC25.49■■□□□ 1.67
Hmgcll1Q8JZS7 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
Hmgcll1Q8JZS7 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Hmgcll1Q8JZS7 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Hmgcll1Q8JZS7 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Hmgcll1Q8JZS7 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC25.46■■□□□ 1.67
Hmgcll1Q8JZS7 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC25.46■■□□□ 1.67
Hmgcll1Q8JZS7 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC25.45■■□□□ 1.67
Hmgcll1Q8JZS7 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
Hmgcll1Q8JZS7 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC25.44■■□□□ 1.66
Hmgcll1Q8JZS7 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
Hmgcll1Q8JZS7 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
Hmgcll1Q8JZS7 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC25.43■■□□□ 1.66
Hmgcll1Q8JZS7 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
Hmgcll1Q8JZS7 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC25.42■■□□□ 1.66
Hmgcll1Q8JZS7 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Hmgcll1Q8JZS7 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC25.41■■□□□ 1.66
Hmgcll1Q8JZS7 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
Hmgcll1Q8JZS7 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Hmgcll1Q8JZS7 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Hmgcll1Q8JZS7 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC25.41■■□□□ 1.66
Hmgcll1Q8JZS7 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Hmgcll1Q8JZS7 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
Hmgcll1Q8JZS7 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Hmgcll1Q8JZS7 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC25.39■■□□□ 1.66
Hmgcll1Q8JZS7 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
Hmgcll1Q8JZS7 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
Hmgcll1Q8JZS7 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
Hmgcll1Q8JZS7 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC25.37■■□□□ 1.65
Hmgcll1Q8JZS7 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
Hmgcll1Q8JZS7 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC25.34■■□□□ 1.65
Hmgcll1Q8JZS7 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC25.34■■□□□ 1.65
Hmgcll1Q8JZS7 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
Hmgcll1Q8JZS7 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Hmgcll1Q8JZS7 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC25.34■■□□□ 1.65
Hmgcll1Q8JZS7 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC25.33■■□□□ 1.65
Hmgcll1Q8JZS7 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC25.33■■□□□ 1.65
Hmgcll1Q8JZS7 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC25.33■■□□□ 1.65
Hmgcll1Q8JZS7 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Hmgcll1Q8JZS7 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.64
Hmgcll1Q8JZS7 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC25.32■■□□□ 1.64
Hmgcll1Q8JZS7 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC25.32■■□□□ 1.64
Hmgcll1Q8JZS7 Gm43445-201ENSMUST00000198564 2091 ntBASIC25.31■■□□□ 1.64
Hmgcll1Q8JZS7 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC25.31■■□□□ 1.64
Hmgcll1Q8JZS7 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC25.31■■□□□ 1.64
Hmgcll1Q8JZS7 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Hmgcll1Q8JZS7 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC25.29■■□□□ 1.64
Hmgcll1Q8JZS7 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Hmgcll1Q8JZS7 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Hmgcll1Q8JZS7 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC25.28■■□□□ 1.64
Hmgcll1Q8JZS7 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Hmgcll1Q8JZS7 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
Hmgcll1Q8JZS7 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC25.27■■□□□ 1.64
Hmgcll1Q8JZS7 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Hmgcll1Q8JZS7 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Hmgcll1Q8JZS7 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Hmgcll1Q8JZS7 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC25.25■■□□□ 1.63
Hmgcll1Q8JZS7 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
Hmgcll1Q8JZS7 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Hmgcll1Q8JZS7 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Hmgcll1Q8JZS7 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC25.24■■□□□ 1.63
Hmgcll1Q8JZS7 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC25.23■■□□□ 1.63
Hmgcll1Q8JZS7 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
Hmgcll1Q8JZS7 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Hmgcll1Q8JZS7 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC25.2■■□□□ 1.62
Hmgcll1Q8JZS7 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC25.2■■□□□ 1.62
Hmgcll1Q8JZS7 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Hmgcll1Q8JZS7 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC25.19■■□□□ 1.62
Hmgcll1Q8JZS7 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Hmgcll1Q8JZS7 Gm6206-201ENSMUST00000133472 2199 ntBASIC25.18■■□□□ 1.62
Hmgcll1Q8JZS7 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC25.18■■□□□ 1.62
Hmgcll1Q8JZS7 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
Hmgcll1Q8JZS7 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC25.18■■□□□ 1.62
Hmgcll1Q8JZS7 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC25.18■■□□□ 1.62
Hmgcll1Q8JZS7 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
Hmgcll1Q8JZS7 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC25.17■■□□□ 1.62
Hmgcll1Q8JZS7 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Hmgcll1Q8JZS7 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC25.16■■□□□ 1.62
Hmgcll1Q8JZS7 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
Hmgcll1Q8JZS7 Pcf11-205ENSMUST00000208255 1720 ntBASIC25.15■■□□□ 1.62
Hmgcll1Q8JZS7 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
Hmgcll1Q8JZS7 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
Hmgcll1Q8JZS7 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
Hmgcll1Q8JZS7 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
Hmgcll1Q8JZS7 Gm30023-201ENSMUST00000197970 889 ntBASIC25.12■■□□□ 1.61
Hmgcll1Q8JZS7 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC25.11■■□□□ 1.61
Hmgcll1Q8JZS7 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC25.11■■□□□ 1.61
Hmgcll1Q8JZS7 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC25.11■■□□□ 1.61
Hmgcll1Q8JZS7 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
Hmgcll1Q8JZS7 Gm9905-201ENSMUST00000065740 1845 ntBASIC25.1■■□□□ 1.61
Hmgcll1Q8JZS7 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC25.1■■□□□ 1.61
Retrieved 100 of 76,532 protein–RNA pairs in 74.9 ms