Protein–RNA interactions for Protein: Q8BP01

Vmac, Vimentin-type intermediate filament-associated coiled-coil protein, mousemouse

Predictions only

Length 174 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VmacQ8BP01 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC28.44■■■□□ 2.14
VmacQ8BP01 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
VmacQ8BP01 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
VmacQ8BP01 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC28.43■■■□□ 2.14
VmacQ8BP01 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
VmacQ8BP01 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
VmacQ8BP01 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC28.41■■■□□ 2.14
VmacQ8BP01 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC28.4■■■□□ 2.14
VmacQ8BP01 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC28.39■■■□□ 2.14
VmacQ8BP01 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC28.39■■■□□ 2.13
VmacQ8BP01 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC28.39■■■□□ 2.13
VmacQ8BP01 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
VmacQ8BP01 Amer2-203ENSMUST00000225247 2662 ntBASIC28.38■■■□□ 2.13
VmacQ8BP01 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC28.37■■■□□ 2.13
VmacQ8BP01 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
VmacQ8BP01 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC28.35■■■□□ 2.13
VmacQ8BP01 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC28.35■■■□□ 2.13
VmacQ8BP01 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
VmacQ8BP01 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC28.32■■■□□ 2.12
VmacQ8BP01 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC28.32■■■□□ 2.12
VmacQ8BP01 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC28.32■■■□□ 2.12
VmacQ8BP01 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC28.31■■■□□ 2.12
VmacQ8BP01 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
VmacQ8BP01 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC28.31■■■□□ 2.12
VmacQ8BP01 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
VmacQ8BP01 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
VmacQ8BP01 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC28.3■■■□□ 2.12
VmacQ8BP01 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
VmacQ8BP01 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC28.3■■■□□ 2.12
VmacQ8BP01 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
VmacQ8BP01 Pcf11-205ENSMUST00000208255 1720 ntBASIC28.28■■■□□ 2.12
VmacQ8BP01 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
VmacQ8BP01 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC28.27■■■□□ 2.12
VmacQ8BP01 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC28.26■■■□□ 2.12
VmacQ8BP01 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
VmacQ8BP01 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
VmacQ8BP01 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
VmacQ8BP01 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
VmacQ8BP01 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
VmacQ8BP01 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC28.24■■■□□ 2.11
VmacQ8BP01 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
VmacQ8BP01 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
VmacQ8BP01 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC28.22■■■□□ 2.11
VmacQ8BP01 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC28.21■■■□□ 2.11
VmacQ8BP01 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
VmacQ8BP01 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
VmacQ8BP01 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
VmacQ8BP01 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC28.19■■■□□ 2.1
VmacQ8BP01 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
VmacQ8BP01 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
VmacQ8BP01 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
VmacQ8BP01 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
VmacQ8BP01 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC28.16■■■□□ 2.1
VmacQ8BP01 Fezf2-202ENSMUST00000224023 1917 ntBASIC28.16■■■□□ 2.1
VmacQ8BP01 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
VmacQ8BP01 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
VmacQ8BP01 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC28.14■■■□□ 2.1
VmacQ8BP01 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
VmacQ8BP01 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC28.12■■■□□ 2.09
VmacQ8BP01 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC28.11■■■□□ 2.09
VmacQ8BP01 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
VmacQ8BP01 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
VmacQ8BP01 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
VmacQ8BP01 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC28.09■■■□□ 2.09
VmacQ8BP01 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
VmacQ8BP01 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
VmacQ8BP01 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
VmacQ8BP01 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC28.09■■■□□ 2.09
VmacQ8BP01 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
VmacQ8BP01 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
VmacQ8BP01 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC28.06■■■□□ 2.08
VmacQ8BP01 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
VmacQ8BP01 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC28.06■■■□□ 2.08
VmacQ8BP01 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
VmacQ8BP01 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC28.04■■■□□ 2.08
VmacQ8BP01 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC28.04■■■□□ 2.08
VmacQ8BP01 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
VmacQ8BP01 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
VmacQ8BP01 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC28.03■■■□□ 2.08
VmacQ8BP01 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
VmacQ8BP01 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC28.01■■■□□ 2.07
VmacQ8BP01 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC28.01■■■□□ 2.07
VmacQ8BP01 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC28.01■■■□□ 2.07
VmacQ8BP01 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC28.01■■■□□ 2.07
VmacQ8BP01 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC28.01■■■□□ 2.07
VmacQ8BP01 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC28■■■□□ 2.07
VmacQ8BP01 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
VmacQ8BP01 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
VmacQ8BP01 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC27.97■■■□□ 2.07
VmacQ8BP01 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC27.97■■■□□ 2.07
VmacQ8BP01 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC27.96■■■□□ 2.07
VmacQ8BP01 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC27.96■■■□□ 2.07
VmacQ8BP01 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
VmacQ8BP01 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
VmacQ8BP01 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
VmacQ8BP01 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC27.93■■■□□ 2.06
VmacQ8BP01 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
VmacQ8BP01 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC27.92■■■□□ 2.06
VmacQ8BP01 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC27.92■■■□□ 2.06
VmacQ8BP01 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
Retrieved 100 of 76,532 protein–RNA pairs in 80.5 ms