Protein–RNA interactions for Protein: Q8BGX7

Spidr, DNA repair-scaffolding protein, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SpidrQ8BGX7 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC29,21■■■□□ 2,27
SpidrQ8BGX7 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC29,21■■■□□ 2,27
SpidrQ8BGX7 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC29,2■■■□□ 2,27
SpidrQ8BGX7 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC29,19■■■□□ 2,26
SpidrQ8BGX7 Gm11599-201ENSMUST00000118720 878 ntBASIC29,17■■■□□ 2,26
SpidrQ8BGX7 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC29,17■■■□□ 2,26
SpidrQ8BGX7 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC29,16■■■□□ 2,26
SpidrQ8BGX7 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC29,16■■■□□ 2,26
SpidrQ8BGX7 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC29,16■■■□□ 2,26
SpidrQ8BGX7 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC29,16■■■□□ 2,26
SpidrQ8BGX7 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC29,15■■■□□ 2,26
SpidrQ8BGX7 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC29,14■■■□□ 2,26
SpidrQ8BGX7 Gm6345-201ENSMUST00000180378 1691 ntBASIC29,13■■■□□ 2,25
SpidrQ8BGX7 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC29,13■■■□□ 2,25
SpidrQ8BGX7 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC29,13■■■□□ 2,25
SpidrQ8BGX7 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC29,13■■■□□ 2,25
SpidrQ8BGX7 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC29,13■■■□□ 2,25
SpidrQ8BGX7 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC29,13■■■□□ 2,25
SpidrQ8BGX7 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC29,12■■■□□ 2,25
SpidrQ8BGX7 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC29,12■■■□□ 2,25
SpidrQ8BGX7 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC29,11■■■□□ 2,25
SpidrQ8BGX7 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC29,11■■■□□ 2,25
SpidrQ8BGX7 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC29,1■■■□□ 2,25
SpidrQ8BGX7 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC29,09■■■□□ 2,25
SpidrQ8BGX7 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC29,09■■■□□ 2,25
SpidrQ8BGX7 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC29,09■■■□□ 2,25
SpidrQ8BGX7 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC29,09■■■□□ 2,25
SpidrQ8BGX7 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC29,08■■■□□ 2,25
SpidrQ8BGX7 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC29,08■■■□□ 2,25
SpidrQ8BGX7 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC29,07■■■□□ 2,24
SpidrQ8BGX7 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC29,07■■■□□ 2,24
SpidrQ8BGX7 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC29,07■■■□□ 2,24
SpidrQ8BGX7 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC29,05■■■□□ 2,24
SpidrQ8BGX7 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC29,02■■■□□ 2,24
SpidrQ8BGX7 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC29,02■■■□□ 2,24
SpidrQ8BGX7 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC29,02■■■□□ 2,24
SpidrQ8BGX7 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC29,01■■■□□ 2,23
SpidrQ8BGX7 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC29,01■■■□□ 2,23
SpidrQ8BGX7 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC29■■■□□ 2,23
SpidrQ8BGX7 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC29■■■□□ 2,23
SpidrQ8BGX7 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC29■■■□□ 2,23
SpidrQ8BGX7 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC28,99■■■□□ 2,23
SpidrQ8BGX7 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC28,99■■■□□ 2,23
SpidrQ8BGX7 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC28,99■■■□□ 2,23
SpidrQ8BGX7 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC28,99■■■□□ 2,23
SpidrQ8BGX7 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC28,97■■■□□ 2,23
SpidrQ8BGX7 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC28,97■■■□□ 2,23
SpidrQ8BGX7 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC28,97■■■□□ 2,23
SpidrQ8BGX7 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC28,97■■■□□ 2,23
SpidrQ8BGX7 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC28,97■■■□□ 2,23
SpidrQ8BGX7 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC28,94■■■□□ 2,22
SpidrQ8BGX7 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC28,94■■■□□ 2,22
SpidrQ8BGX7 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC28,93■■■□□ 2,22
SpidrQ8BGX7 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC28,93■■■□□ 2,22
SpidrQ8BGX7 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC28,93■■■□□ 2,22
SpidrQ8BGX7 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC28,93■■■□□ 2,22
SpidrQ8BGX7 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC28,93■■■□□ 2,22
SpidrQ8BGX7 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC28,88■■■□□ 2,21
SpidrQ8BGX7 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC28,88■■■□□ 2,21
SpidrQ8BGX7 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC28,87■■■□□ 2,21
SpidrQ8BGX7 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC28,86■■■□□ 2,21
SpidrQ8BGX7 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC28,86■■■□□ 2,21
SpidrQ8BGX7 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC28,86■■■□□ 2,21
SpidrQ8BGX7 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC28,84■■■□□ 2,21
SpidrQ8BGX7 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC28,84■■■□□ 2,21
SpidrQ8BGX7 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC28,83■■■□□ 2,21
SpidrQ8BGX7 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC28,83■■■□□ 2,21
SpidrQ8BGX7 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC28,83■■■□□ 2,21
SpidrQ8BGX7 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC28,82■■■□□ 2,2
SpidrQ8BGX7 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC28,82■■■□□ 2,2
SpidrQ8BGX7 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC28,82■■■□□ 2,2
SpidrQ8BGX7 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC28,82■■■□□ 2,2
SpidrQ8BGX7 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC28,82■■■□□ 2,2
SpidrQ8BGX7 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC28,81■■■□□ 2,2
SpidrQ8BGX7 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC28,81■■■□□ 2,2
SpidrQ8BGX7 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC28,8■■■□□ 2,2
SpidrQ8BGX7 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC28,8■■■□□ 2,2
SpidrQ8BGX7 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC28,8■■■□□ 2,2
SpidrQ8BGX7 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC28,8■■■□□ 2,2
SpidrQ8BGX7 AC131739.1-201ENSMUST00000221692 1245 ntBASIC28,8■■■□□ 2,2
SpidrQ8BGX7 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC28,8■■■□□ 2,2
SpidrQ8BGX7 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC28,8■■■□□ 2,2
SpidrQ8BGX7 Gm11175-201ENSMUST00000116172 543 ntBASIC28,78■■■□□ 2,2
SpidrQ8BGX7 Gm30023-201ENSMUST00000197970 889 ntBASIC28,78■■■□□ 2,2
SpidrQ8BGX7 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC28,78■■■□□ 2,2
SpidrQ8BGX7 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC28,77■■■□□ 2,2
SpidrQ8BGX7 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC28,76■■■□□ 2,19
SpidrQ8BGX7 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC28,76■■■□□ 2,19
SpidrQ8BGX7 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC28,75■■■□□ 2,19
SpidrQ8BGX7 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC28,74■■■□□ 2,19
SpidrQ8BGX7 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC28,74■■■□□ 2,19
SpidrQ8BGX7 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC28,74■■■□□ 2,19
SpidrQ8BGX7 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC28,73■■■□□ 2,19
SpidrQ8BGX7 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC28,73■■■□□ 2,19
SpidrQ8BGX7 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC28,73■■■□□ 2,19
SpidrQ8BGX7 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC28,7■■■□□ 2,18
SpidrQ8BGX7 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC28,7■■■□□ 2,18
SpidrQ8BGX7 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC28,69■■■□□ 2,18
SpidrQ8BGX7 Mir6538-201ENSMUST00000183713 110 ntBASIC28,69■■■□□ 2,18
SpidrQ8BGX7 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC28,69■■■□□ 2,18
Retrieved 100 of 76,532 protein–RNA pairs in 21,9 ms