Protein–RNA interactions for Protein: Q80T11

Ush1g, Usher syndrome type-1G protein homolog, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1gQ80T11 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
Ush1gQ80T11 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC26.88■■□□□ 1.89
Ush1gQ80T11 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
Ush1gQ80T11 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
Ush1gQ80T11 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
Ush1gQ80T11 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
Ush1gQ80T11 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
Ush1gQ80T11 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
Ush1gQ80T11 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
Ush1gQ80T11 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
Ush1gQ80T11 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
Ush1gQ80T11 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
Ush1gQ80T11 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Ush1gQ80T11 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC26.8■■□□□ 1.88
Ush1gQ80T11 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC26.8■■□□□ 1.88
Ush1gQ80T11 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC26.8■■□□□ 1.88
Ush1gQ80T11 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC26.78■■□□□ 1.88
Ush1gQ80T11 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
Ush1gQ80T11 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC26.77■■□□□ 1.88
Ush1gQ80T11 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC26.77■■□□□ 1.88
Ush1gQ80T11 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
Ush1gQ80T11 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
Ush1gQ80T11 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC26.76■■□□□ 1.87
Ush1gQ80T11 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Ush1gQ80T11 Gm11599-201ENSMUST00000118720 878 ntBASIC26.73■■□□□ 1.87
Ush1gQ80T11 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
Ush1gQ80T11 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
Ush1gQ80T11 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC26.7■■□□□ 1.86
Ush1gQ80T11 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
Ush1gQ80T11 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC26.69■■□□□ 1.86
Ush1gQ80T11 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Ush1gQ80T11 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC26.68■■□□□ 1.86
Ush1gQ80T11 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
Ush1gQ80T11 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
Ush1gQ80T11 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC26.66■■□□□ 1.86
Ush1gQ80T11 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
Ush1gQ80T11 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC26.66■■□□□ 1.86
Ush1gQ80T11 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Ush1gQ80T11 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC26.66■■□□□ 1.86
Ush1gQ80T11 Zxda-201ENSMUST00000117281 2621 ntBASIC26.65■■□□□ 1.86
Ush1gQ80T11 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC26.65■■□□□ 1.86
Ush1gQ80T11 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC26.64■■□□□ 1.86
Ush1gQ80T11 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
Ush1gQ80T11 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC26.63■■□□□ 1.85
Ush1gQ80T11 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC26.63■■□□□ 1.85
Ush1gQ80T11 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC26.63■■□□□ 1.85
Ush1gQ80T11 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
Ush1gQ80T11 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC26.61■■□□□ 1.85
Ush1gQ80T11 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC26.61■■□□□ 1.85
Ush1gQ80T11 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
Ush1gQ80T11 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC26.57■■□□□ 1.84
Ush1gQ80T11 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
Ush1gQ80T11 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC26.56■■□□□ 1.84
Ush1gQ80T11 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
Ush1gQ80T11 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC26.55■■□□□ 1.84
Ush1gQ80T11 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC26.55■■□□□ 1.84
Ush1gQ80T11 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Ush1gQ80T11 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC26.54■■□□□ 1.84
Ush1gQ80T11 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
Ush1gQ80T11 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC26.51■■□□□ 1.84
Ush1gQ80T11 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
Ush1gQ80T11 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC26.5■■□□□ 1.83
Ush1gQ80T11 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
Ush1gQ80T11 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC26.5■■□□□ 1.83
Ush1gQ80T11 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
Ush1gQ80T11 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
Ush1gQ80T11 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC26.49■■□□□ 1.83
Ush1gQ80T11 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Ush1gQ80T11 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Ush1gQ80T11 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC26.48■■□□□ 1.83
Ush1gQ80T11 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC26.48■■□□□ 1.83
Ush1gQ80T11 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Ush1gQ80T11 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Ush1gQ80T11 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC26.48■■□□□ 1.83
Ush1gQ80T11 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC26.47■■□□□ 1.83
Ush1gQ80T11 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC26.47■■□□□ 1.83
Ush1gQ80T11 Gm43445-201ENSMUST00000198564 2091 ntBASIC26.46■■□□□ 1.83
Ush1gQ80T11 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
Ush1gQ80T11 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC26.46■■□□□ 1.83
Ush1gQ80T11 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC26.46■■□□□ 1.83
Ush1gQ80T11 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC26.45■■□□□ 1.83
Ush1gQ80T11 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC26.45■■□□□ 1.82
Ush1gQ80T11 Mir6538-201ENSMUST00000183713 110 ntBASIC26.45■■□□□ 1.82
Ush1gQ80T11 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC26.45■■□□□ 1.82
Ush1gQ80T11 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC26.45■■□□□ 1.82
Ush1gQ80T11 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
Ush1gQ80T11 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Ush1gQ80T11 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
Ush1gQ80T11 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC26.43■■□□□ 1.82
Ush1gQ80T11 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC26.43■■□□□ 1.82
Ush1gQ80T11 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Ush1gQ80T11 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Ush1gQ80T11 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC26.42■■□□□ 1.82
Ush1gQ80T11 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
Ush1gQ80T11 Gm6206-201ENSMUST00000133472 2199 ntBASIC26.4■■□□□ 1.82
Ush1gQ80T11 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Ush1gQ80T11 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Ush1gQ80T11 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC26.39■■□□□ 1.82
Ush1gQ80T11 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
Ush1gQ80T11 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
Retrieved 100 of 76,532 protein–RNA pairs in 140.8 ms