Protein–RNA interactions for Protein: Q61982

Notch3, Neurogenic locus notch homolog protein 3, mousemouse

Predictions only

Length 2,318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Notch3Q61982 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Notch3Q61982 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC18.48■□□□□ 0.55
Notch3Q61982 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Notch3Q61982 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Notch3Q61982 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC18.47■□□□□ 0.55
Notch3Q61982 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Notch3Q61982 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Notch3Q61982 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Notch3Q61982 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC18.46■□□□□ 0.55
Notch3Q61982 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Notch3Q61982 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Notch3Q61982 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Notch3Q61982 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Notch3Q61982 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Notch3Q61982 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC18.43■□□□□ 0.54
Notch3Q61982 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC18.43■□□□□ 0.54
Notch3Q61982 Mir6538-201ENSMUST00000183713 110 ntBASIC18.43■□□□□ 0.54
Notch3Q61982 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC18.42■□□□□ 0.54
Notch3Q61982 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Notch3Q61982 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Notch3Q61982 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC18.41■□□□□ 0.54
Notch3Q61982 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Notch3Q61982 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Notch3Q61982 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Notch3Q61982 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Notch3Q61982 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Notch3Q61982 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Notch3Q61982 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Notch3Q61982 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Notch3Q61982 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Notch3Q61982 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Notch3Q61982 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Notch3Q61982 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Notch3Q61982 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Notch3Q61982 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Notch3Q61982 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Notch3Q61982 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC18.35■□□□□ 0.53
Notch3Q61982 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC18.35■□□□□ 0.53
Notch3Q61982 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Notch3Q61982 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Notch3Q61982 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Notch3Q61982 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Notch3Q61982 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC18.32■□□□□ 0.52
Notch3Q61982 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Notch3Q61982 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Notch3Q61982 Cap2-205ENSMUST00000225824 1634 ntBASIC18.31■□□□□ 0.52
Notch3Q61982 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC18.31■□□□□ 0.52
Notch3Q61982 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC18.31■□□□□ 0.52
Notch3Q61982 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Notch3Q61982 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC18.3■□□□□ 0.52
Notch3Q61982 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Notch3Q61982 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Notch3Q61982 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Notch3Q61982 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Notch3Q61982 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC18.29■□□□□ 0.52
Notch3Q61982 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
Notch3Q61982 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Notch3Q61982 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Notch3Q61982 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Notch3Q61982 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Notch3Q61982 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Notch3Q61982 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Notch3Q61982 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Notch3Q61982 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC18.26■□□□□ 0.51
Notch3Q61982 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Notch3Q61982 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Notch3Q61982 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC18.26■□□□□ 0.51
Notch3Q61982 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Notch3Q61982 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
Notch3Q61982 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Notch3Q61982 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Notch3Q61982 AC167019.3-201ENSMUST00000228225 1266 ntBASIC18.23■□□□□ 0.51
Notch3Q61982 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Notch3Q61982 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC18.23■□□□□ 0.51
Notch3Q61982 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Notch3Q61982 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC18.22■□□□□ 0.51
Notch3Q61982 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Notch3Q61982 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Notch3Q61982 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
Notch3Q61982 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Notch3Q61982 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC18.21■□□□□ 0.51
Notch3Q61982 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Notch3Q61982 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
Notch3Q61982 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Notch3Q61982 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Notch3Q61982 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Notch3Q61982 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Notch3Q61982 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Notch3Q61982 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Notch3Q61982 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Notch3Q61982 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Notch3Q61982 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Notch3Q61982 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Notch3Q61982 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Notch3Q61982 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Notch3Q61982 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Notch3Q61982 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Notch3Q61982 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Notch3Q61982 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Notch3Q61982 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms