Protein–RNA interactions for Protein: Q3UMQ8

Naf1, H/ACA ribonucleoprotein complex non-core subunit NAF1, mousemouse

Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Naf1Q3UMQ8 Nkain2-201ENSMUST00000092602 558 ntBASIC24.97■■□□□ 1.59
Naf1Q3UMQ8 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
Naf1Q3UMQ8 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC24.96■■□□□ 1.59
Naf1Q3UMQ8 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC24.96■■□□□ 1.59
Naf1Q3UMQ8 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Naf1Q3UMQ8 AC153504.1-201ENSMUST00000218379 2290 ntBASIC24.93■■□□□ 1.58
Naf1Q3UMQ8 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC24.93■■□□□ 1.58
Naf1Q3UMQ8 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC24.92■■□□□ 1.58
Naf1Q3UMQ8 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC24.92■■□□□ 1.58
Naf1Q3UMQ8 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Naf1Q3UMQ8 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Naf1Q3UMQ8 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Naf1Q3UMQ8 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
Naf1Q3UMQ8 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC24.9■■□□□ 1.58
Naf1Q3UMQ8 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Naf1Q3UMQ8 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC24.89■■□□□ 1.58
Naf1Q3UMQ8 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
Naf1Q3UMQ8 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC24.89■■□□□ 1.57
Naf1Q3UMQ8 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC24.88■■□□□ 1.57
Naf1Q3UMQ8 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
Naf1Q3UMQ8 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Naf1Q3UMQ8 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC24.85■■□□□ 1.57
Naf1Q3UMQ8 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Naf1Q3UMQ8 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC24.83■■□□□ 1.57
Naf1Q3UMQ8 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
Naf1Q3UMQ8 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
Naf1Q3UMQ8 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.56
Naf1Q3UMQ8 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC24.82■■□□□ 1.56
Naf1Q3UMQ8 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
Naf1Q3UMQ8 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
Naf1Q3UMQ8 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC24.81■■□□□ 1.56
Naf1Q3UMQ8 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC24.81■■□□□ 1.56
Naf1Q3UMQ8 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC24.81■■□□□ 1.56
Naf1Q3UMQ8 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC24.8■■□□□ 1.56
Naf1Q3UMQ8 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC24.8■■□□□ 1.56
Naf1Q3UMQ8 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
Naf1Q3UMQ8 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
Naf1Q3UMQ8 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC24.78■■□□□ 1.56
Naf1Q3UMQ8 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC24.78■■□□□ 1.56
Naf1Q3UMQ8 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC24.77■■□□□ 1.56
Naf1Q3UMQ8 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Naf1Q3UMQ8 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC24.77■■□□□ 1.56
Naf1Q3UMQ8 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC24.77■■□□□ 1.56
Naf1Q3UMQ8 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
Naf1Q3UMQ8 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
Naf1Q3UMQ8 Gm5987-201ENSMUST00000196433 1151 ntBASIC24.76■■□□□ 1.55
Naf1Q3UMQ8 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
Naf1Q3UMQ8 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Naf1Q3UMQ8 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
Naf1Q3UMQ8 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC24.74■■□□□ 1.55
Naf1Q3UMQ8 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Naf1Q3UMQ8 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
Naf1Q3UMQ8 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
Naf1Q3UMQ8 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Naf1Q3UMQ8 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Naf1Q3UMQ8 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC24.72■■□□□ 1.55
Naf1Q3UMQ8 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC24.71■■□□□ 1.55
Naf1Q3UMQ8 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC24.7■■□□□ 1.54
Naf1Q3UMQ8 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Naf1Q3UMQ8 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC24.7■■□□□ 1.54
Naf1Q3UMQ8 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
Naf1Q3UMQ8 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
Naf1Q3UMQ8 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
Naf1Q3UMQ8 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Naf1Q3UMQ8 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Naf1Q3UMQ8 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
Naf1Q3UMQ8 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC24.67■■□□□ 1.54
Naf1Q3UMQ8 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC24.67■■□□□ 1.54
Naf1Q3UMQ8 Zxda-201ENSMUST00000117281 2621 ntBASIC24.65■■□□□ 1.54
Naf1Q3UMQ8 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Naf1Q3UMQ8 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC24.65■■□□□ 1.54
Naf1Q3UMQ8 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Naf1Q3UMQ8 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC24.65■■□□□ 1.54
Naf1Q3UMQ8 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC24.64■■□□□ 1.54
Naf1Q3UMQ8 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC24.64■■□□□ 1.53
Naf1Q3UMQ8 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Naf1Q3UMQ8 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Naf1Q3UMQ8 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Naf1Q3UMQ8 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC24.61■■□□□ 1.53
Naf1Q3UMQ8 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
Naf1Q3UMQ8 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
Naf1Q3UMQ8 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
Naf1Q3UMQ8 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC24.6■■□□□ 1.53
Naf1Q3UMQ8 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC24.6■■□□□ 1.53
Naf1Q3UMQ8 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC24.6■■□□□ 1.53
Naf1Q3UMQ8 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC24.6■■□□□ 1.53
Naf1Q3UMQ8 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Naf1Q3UMQ8 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Naf1Q3UMQ8 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC24.59■■□□□ 1.53
Naf1Q3UMQ8 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
Naf1Q3UMQ8 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Naf1Q3UMQ8 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Naf1Q3UMQ8 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Naf1Q3UMQ8 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC24.57■■□□□ 1.52
Naf1Q3UMQ8 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC24.57■■□□□ 1.52
Naf1Q3UMQ8 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
Naf1Q3UMQ8 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC24.56■■□□□ 1.52
Naf1Q3UMQ8 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC24.56■■□□□ 1.52
Naf1Q3UMQ8 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
Naf1Q3UMQ8 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC24.56■■□□□ 1.52
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms