Protein–RNA interactions for Protein: Q3U1N2

Srebf2, Sterol regulatory element-binding protein 2, mousemouse

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srebf2Q3U1N2 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC27.17■■□□□ 1.94
Srebf2Q3U1N2 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
Srebf2Q3U1N2 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC27.16■■□□□ 1.94
Srebf2Q3U1N2 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC27.16■■□□□ 1.94
Srebf2Q3U1N2 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC27.16■■□□□ 1.94
Srebf2Q3U1N2 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC27.15■■□□□ 1.94
Srebf2Q3U1N2 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
Srebf2Q3U1N2 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
Srebf2Q3U1N2 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC27.13■■□□□ 1.93
Srebf2Q3U1N2 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
Srebf2Q3U1N2 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC27.13■■□□□ 1.93
Srebf2Q3U1N2 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
Srebf2Q3U1N2 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC27.12■■□□□ 1.93
Srebf2Q3U1N2 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
Srebf2Q3U1N2 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC27.11■■□□□ 1.93
Srebf2Q3U1N2 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
Srebf2Q3U1N2 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC27.1■■□□□ 1.93
Srebf2Q3U1N2 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC27.1■■□□□ 1.93
Srebf2Q3U1N2 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC27.1■■□□□ 1.93
Srebf2Q3U1N2 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
Srebf2Q3U1N2 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
Srebf2Q3U1N2 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC27.06■■□□□ 1.92
Srebf2Q3U1N2 Gm6345-201ENSMUST00000180378 1691 ntBASIC27.06■■□□□ 1.92
Srebf2Q3U1N2 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC27.06■■□□□ 1.92
Srebf2Q3U1N2 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC27.06■■□□□ 1.92
Srebf2Q3U1N2 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
Srebf2Q3U1N2 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
Srebf2Q3U1N2 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
Srebf2Q3U1N2 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
Srebf2Q3U1N2 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC27.03■■□□□ 1.92
Srebf2Q3U1N2 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
Srebf2Q3U1N2 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC27.02■■□□□ 1.92
Srebf2Q3U1N2 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC27■■□□□ 1.91
Srebf2Q3U1N2 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC27■■□□□ 1.91
Srebf2Q3U1N2 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
Srebf2Q3U1N2 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
Srebf2Q3U1N2 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
Srebf2Q3U1N2 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
Srebf2Q3U1N2 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
Srebf2Q3U1N2 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC26.98■■□□□ 1.91
Srebf2Q3U1N2 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
Srebf2Q3U1N2 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
Srebf2Q3U1N2 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
Srebf2Q3U1N2 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
Srebf2Q3U1N2 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC26.96■■□□□ 1.91
Srebf2Q3U1N2 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC26.96■■□□□ 1.91
Srebf2Q3U1N2 Mir6538-201ENSMUST00000183713 110 ntBASIC26.94■■□□□ 1.9
Srebf2Q3U1N2 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC26.94■■□□□ 1.9
Srebf2Q3U1N2 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC26.93■■□□□ 1.9
Srebf2Q3U1N2 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC26.93■■□□□ 1.9
Srebf2Q3U1N2 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
Srebf2Q3U1N2 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC26.93■■□□□ 1.9
Srebf2Q3U1N2 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC26.93■■□□□ 1.9
Srebf2Q3U1N2 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
Srebf2Q3U1N2 Gm11175-201ENSMUST00000116172 543 ntBASIC26.92■■□□□ 1.9
Srebf2Q3U1N2 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
Srebf2Q3U1N2 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC26.91■■□□□ 1.9
Srebf2Q3U1N2 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC26.91■■□□□ 1.9
Srebf2Q3U1N2 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC26.91■■□□□ 1.9
Srebf2Q3U1N2 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC26.9■■□□□ 1.9
Srebf2Q3U1N2 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
Srebf2Q3U1N2 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
Srebf2Q3U1N2 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
Srebf2Q3U1N2 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC26.87■■□□□ 1.89
Srebf2Q3U1N2 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
Srebf2Q3U1N2 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
Srebf2Q3U1N2 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC26.87■■□□□ 1.89
Srebf2Q3U1N2 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC26.86■■□□□ 1.89
Srebf2Q3U1N2 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC26.85■■□□□ 1.89
Srebf2Q3U1N2 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
Srebf2Q3U1N2 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC26.85■■□□□ 1.89
Srebf2Q3U1N2 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC26.85■■□□□ 1.89
Srebf2Q3U1N2 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
Srebf2Q3U1N2 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC26.84■■□□□ 1.89
Srebf2Q3U1N2 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
Srebf2Q3U1N2 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC26.83■■□□□ 1.89
Srebf2Q3U1N2 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
Srebf2Q3U1N2 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
Srebf2Q3U1N2 Zxda-201ENSMUST00000117281 2621 ntBASIC26.81■■□□□ 1.88
Srebf2Q3U1N2 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC26.8■■□□□ 1.88
Srebf2Q3U1N2 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC26.8■■□□□ 1.88
Srebf2Q3U1N2 Cap2-205ENSMUST00000225824 1634 ntBASIC26.79■■□□□ 1.88
Srebf2Q3U1N2 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
Srebf2Q3U1N2 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Srebf2Q3U1N2 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.88
Srebf2Q3U1N2 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
Srebf2Q3U1N2 AC131739.1-201ENSMUST00000221692 1245 ntBASIC26.74■■□□□ 1.87
Srebf2Q3U1N2 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
Srebf2Q3U1N2 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC26.72■■□□□ 1.87
Srebf2Q3U1N2 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
Srebf2Q3U1N2 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
Srebf2Q3U1N2 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC26.7■■□□□ 1.87
Srebf2Q3U1N2 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC26.69■■□□□ 1.86
Srebf2Q3U1N2 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC26.69■■□□□ 1.86
Srebf2Q3U1N2 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC26.69■■□□□ 1.86
Srebf2Q3U1N2 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC26.69■■□□□ 1.86
Srebf2Q3U1N2 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC26.67■■□□□ 1.86
Srebf2Q3U1N2 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC26.67■■□□□ 1.86
Srebf2Q3U1N2 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC26.67■■□□□ 1.86
Srebf2Q3U1N2 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms