Protein–RNA interactions for Protein: Q2EG98

Pkd1l3, Polycystic kidney disease protein 1-like 3, mousemouse

Predictions only

Length 2,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pkd1l3Q2EG98 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Pkd1l3Q2EG98 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Pkd1l3Q2EG98 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC22.09■■□□□ 1.13
Pkd1l3Q2EG98 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC22.08■■□□□ 1.13
Pkd1l3Q2EG98 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.13
Pkd1l3Q2EG98 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC22.08■■□□□ 1.13
Pkd1l3Q2EG98 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Pkd1l3Q2EG98 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC22.08■■□□□ 1.13
Pkd1l3Q2EG98 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Pkd1l3Q2EG98 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC22.07■■□□□ 1.12
Pkd1l3Q2EG98 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Pkd1l3Q2EG98 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
Pkd1l3Q2EG98 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Pkd1l3Q2EG98 Gm7432-201ENSMUST00000210343 879 ntBASIC22.04■■□□□ 1.12
Pkd1l3Q2EG98 Gm6345-201ENSMUST00000180378 1691 ntBASIC22.04■■□□□ 1.12
Pkd1l3Q2EG98 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Pkd1l3Q2EG98 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Pkd1l3Q2EG98 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC22.02■■□□□ 1.11
Pkd1l3Q2EG98 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC22.01■■□□□ 1.11
Pkd1l3Q2EG98 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Pkd1l3Q2EG98 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC22.01■■□□□ 1.11
Pkd1l3Q2EG98 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Pkd1l3Q2EG98 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Pkd1l3Q2EG98 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC22■■□□□ 1.11
Pkd1l3Q2EG98 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
Pkd1l3Q2EG98 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC21.99■■□□□ 1.11
Pkd1l3Q2EG98 Nkain2-201ENSMUST00000092602 558 ntBASIC21.99■■□□□ 1.11
Pkd1l3Q2EG98 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Pkd1l3Q2EG98 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Pkd1l3Q2EG98 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
Pkd1l3Q2EG98 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Pkd1l3Q2EG98 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
Pkd1l3Q2EG98 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
Pkd1l3Q2EG98 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC21.97■■□□□ 1.11
Pkd1l3Q2EG98 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Pkd1l3Q2EG98 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Pkd1l3Q2EG98 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Pkd1l3Q2EG98 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Pkd1l3Q2EG98 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Pkd1l3Q2EG98 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Pkd1l3Q2EG98 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Pkd1l3Q2EG98 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
Pkd1l3Q2EG98 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC21.92■■□□□ 1.1
Pkd1l3Q2EG98 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Pkd1l3Q2EG98 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Pkd1l3Q2EG98 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Pkd1l3Q2EG98 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC21.9■■□□□ 1.1
Pkd1l3Q2EG98 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Pkd1l3Q2EG98 AC153504.1-201ENSMUST00000218379 2290 ntBASIC21.89■■□□□ 1.09
Pkd1l3Q2EG98 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC21.88■■□□□ 1.09
Pkd1l3Q2EG98 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
Pkd1l3Q2EG98 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Pkd1l3Q2EG98 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
Pkd1l3Q2EG98 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC21.86■■□□□ 1.09
Pkd1l3Q2EG98 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC21.86■■□□□ 1.09
Pkd1l3Q2EG98 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
Pkd1l3Q2EG98 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Pkd1l3Q2EG98 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC21.86■■□□□ 1.09
Pkd1l3Q2EG98 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Pkd1l3Q2EG98 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Pkd1l3Q2EG98 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Pkd1l3Q2EG98 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Pkd1l3Q2EG98 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Pkd1l3Q2EG98 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
Pkd1l3Q2EG98 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC21.84■■□□□ 1.09
Pkd1l3Q2EG98 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Pkd1l3Q2EG98 Gm11599-201ENSMUST00000118720 878 ntBASIC21.83■■□□□ 1.09
Pkd1l3Q2EG98 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
Pkd1l3Q2EG98 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
Pkd1l3Q2EG98 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Pkd1l3Q2EG98 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Pkd1l3Q2EG98 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Pkd1l3Q2EG98 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Pkd1l3Q2EG98 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Pkd1l3Q2EG98 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Pkd1l3Q2EG98 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Pkd1l3Q2EG98 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC21.78■■□□□ 1.08
Pkd1l3Q2EG98 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC21.78■■□□□ 1.08
Pkd1l3Q2EG98 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Pkd1l3Q2EG98 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Pkd1l3Q2EG98 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC21.78■■□□□ 1.08
Pkd1l3Q2EG98 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Pkd1l3Q2EG98 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Pkd1l3Q2EG98 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC21.77■■□□□ 1.08
Pkd1l3Q2EG98 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Pkd1l3Q2EG98 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Pkd1l3Q2EG98 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
Pkd1l3Q2EG98 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
Pkd1l3Q2EG98 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Pkd1l3Q2EG98 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
Pkd1l3Q2EG98 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC21.74■■□□□ 1.07
Pkd1l3Q2EG98 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pkd1l3Q2EG98 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC21.74■■□□□ 1.07
Pkd1l3Q2EG98 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pkd1l3Q2EG98 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Pkd1l3Q2EG98 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Pkd1l3Q2EG98 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
Pkd1l3Q2EG98 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Pkd1l3Q2EG98 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC21.73■■□□□ 1.07
Pkd1l3Q2EG98 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC21.71■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms