Protein–RNA interactions for Protein: P54869

Hmgcs2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, mousemouse

Predictions only

Length 508 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgcs2P54869 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC27.8■■■□□ 2.04
Hmgcs2P54869 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC27.79■■■□□ 2.04
Hmgcs2P54869 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
Hmgcs2P54869 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC27.78■■■□□ 2.04
Hmgcs2P54869 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
Hmgcs2P54869 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC27.77■■■□□ 2.04
Hmgcs2P54869 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC27.76■■■□□ 2.04
Hmgcs2P54869 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC27.76■■■□□ 2.03
Hmgcs2P54869 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC27.76■■■□□ 2.03
Hmgcs2P54869 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC27.75■■■□□ 2.03
Hmgcs2P54869 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC27.74■■■□□ 2.03
Hmgcs2P54869 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
Hmgcs2P54869 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
Hmgcs2P54869 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
Hmgcs2P54869 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
Hmgcs2P54869 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
Hmgcs2P54869 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC27.71■■■□□ 2.03
Hmgcs2P54869 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.03
Hmgcs2P54869 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.02
Hmgcs2P54869 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
Hmgcs2P54869 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC27.69■■■□□ 2.02
Hmgcs2P54869 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
Hmgcs2P54869 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC27.67■■■□□ 2.02
Hmgcs2P54869 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC27.67■■■□□ 2.02
Hmgcs2P54869 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC27.66■■■□□ 2.02
Hmgcs2P54869 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
Hmgcs2P54869 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
Hmgcs2P54869 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC27.65■■■□□ 2.02
Hmgcs2P54869 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC27.64■■■□□ 2.02
Hmgcs2P54869 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
Hmgcs2P54869 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC27.63■■■□□ 2.01
Hmgcs2P54869 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC27.62■■■□□ 2.01
Hmgcs2P54869 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC27.62■■■□□ 2.01
Hmgcs2P54869 Gm6345-201ENSMUST00000180378 1691 ntBASIC27.62■■■□□ 2.01
Hmgcs2P54869 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
Hmgcs2P54869 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC27.61■■■□□ 2.01
Hmgcs2P54869 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC27.6■■■□□ 2.01
Hmgcs2P54869 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
Hmgcs2P54869 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC27.6■■■□□ 2.01
Hmgcs2P54869 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC27.6■■■□□ 2.01
Hmgcs2P54869 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
Hmgcs2P54869 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
Hmgcs2P54869 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC27.59■■■□□ 2.01
Hmgcs2P54869 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC27.58■■■□□ 2.01
Hmgcs2P54869 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC27.58■■■□□ 2.01
Hmgcs2P54869 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC27.58■■■□□ 2.01
Hmgcs2P54869 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC27.57■■■□□ 2
Hmgcs2P54869 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC27.57■■■□□ 2
Hmgcs2P54869 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC27.57■■■□□ 2
Hmgcs2P54869 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC27.56■■■□□ 2
Hmgcs2P54869 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
Hmgcs2P54869 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC27.54■■■□□ 2
Hmgcs2P54869 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC27.53■■■□□ 2
Hmgcs2P54869 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC27.53■■■□□ 2
Hmgcs2P54869 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC27.53■■■□□ 2
Hmgcs2P54869 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC27.51■■■□□ 2
Hmgcs2P54869 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC27.51■■□□□ 1.99
Hmgcs2P54869 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC27.51■■□□□ 1.99
Hmgcs2P54869 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
Hmgcs2P54869 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
Hmgcs2P54869 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC27.5■■□□□ 1.99
Hmgcs2P54869 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC27.49■■□□□ 1.99
Hmgcs2P54869 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC27.49■■□□□ 1.99
Hmgcs2P54869 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
Hmgcs2P54869 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC27.47■■□□□ 1.99
Hmgcs2P54869 Gm11175-201ENSMUST00000116172 543 ntBASIC27.46■■□□□ 1.99
Hmgcs2P54869 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
Hmgcs2P54869 AC131739.1-201ENSMUST00000221692 1245 ntBASIC27.45■■□□□ 1.98
Hmgcs2P54869 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC27.45■■□□□ 1.98
Hmgcs2P54869 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC27.44■■□□□ 1.98
Hmgcs2P54869 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC27.44■■□□□ 1.98
Hmgcs2P54869 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC27.43■■□□□ 1.98
Hmgcs2P54869 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
Hmgcs2P54869 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC27.41■■□□□ 1.98
Hmgcs2P54869 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
Hmgcs2P54869 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
Hmgcs2P54869 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC27.4■■□□□ 1.98
Hmgcs2P54869 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
Hmgcs2P54869 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
Hmgcs2P54869 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
Hmgcs2P54869 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.97
Hmgcs2P54869 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
Hmgcs2P54869 Mir6538-201ENSMUST00000183713 110 ntBASIC27.38■■□□□ 1.97
Hmgcs2P54869 Gm30023-201ENSMUST00000197970 889 ntBASIC27.38■■□□□ 1.97
Hmgcs2P54869 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
Hmgcs2P54869 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC27.38■■□□□ 1.97
Hmgcs2P54869 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
Hmgcs2P54869 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC27.37■■□□□ 1.97
Hmgcs2P54869 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
Hmgcs2P54869 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
Hmgcs2P54869 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
Hmgcs2P54869 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC27.35■■□□□ 1.97
Hmgcs2P54869 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
Hmgcs2P54869 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
Hmgcs2P54869 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC27.33■■□□□ 1.97
Hmgcs2P54869 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
Hmgcs2P54869 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
Hmgcs2P54869 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
Hmgcs2P54869 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC27.32■■□□□ 1.96
Hmgcs2P54869 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC27.31■■□□□ 1.96
Retrieved 100 of 76,532 protein–RNA pairs in 17 ms