Protein–RNA interactions for Protein: P40968

CDC40, Pre-mRNA-processing factor 17, yeastyeast

Predicted RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CDC40P40968 DLD2YDL178W 1593 nt7.12□□□□□ -1.27
CDC40P40968 SAM2YDR502C 1155 nt7.11□□□□□ -1.27
CDC40P40968 PEX2YJL210W 816 nt7.11□□□□□ -1.27
CDC40P40968 COQ2YNR041C 1119 nt7.11□□□□□ -1.27
CDC40P40968 CBK1YNL161W 2271 nt7.11□□□□□ -1.27
CDC40P40968 HEM13YDR044W 987 nt7.1□□□□□ -1.27
CDC40P40968 HIP1YGR191W 1812 nt7.1□□□□□ -1.27
CDC40P40968 LSM5YER146W 282 nt7.09□□□□□ -1.27
CDC40P40968 MET28YIR017C 564 nt7.09□□□□□ -1.27
CDC40P40968 YMR103CYMR103C 363 nt7.09□□□□□ -1.27
CDC40P40968 DUS3YLR401C 2007 nt7.09□□□□□ -1.27
CDC40P40968 RIM2YBR192W 1134 nt7.08□□□□□ -1.28
CDC40P40968 ECM10YEL030W 1935 nt7.07□□□□□ -1.28
CDC40P40968 UTH1YKR042W 1098 nt7.07□□□□□ -1.28
CDC40P40968 XYL2YLR070C 1071 nt7.07□□□□□ -1.28
CDC40P40968 AKR2YOR034C 2250 nt7.07□□□□□ -1.28
CDC40P40968 GUT1YHL032C 2130 nt7.06□□□□□ -1.28
CDC40P40968 INH1YDL181W 258 nt7.06□□□□□ -1.28
CDC40P40968 YGL034CYGL034C 366 nt7.06□□□□□ -1.28
CDC40P40968 CLB6YGR109C 1143 nt7.06□□□□□ -1.28
CDC40P40968 AIM1YAL046C 357 nt7.06□□□□□ -1.28
CDC40P40968 RPC31YNL151C 756 nt7.06□□□□□ -1.28
CDC40P40968 RPL4BYDR012W 1089 nt7.05□□□□□ -1.28
CDC40P40968 MGM101YJR144W 810 nt7.05□□□□□ -1.28
CDC40P40968 YLR046CYLR046C 813 nt7.05□□□□□ -1.28
CDC40P40968 RPL4AYBR031W 1089 nt7.05□□□□□ -1.28
CDC40P40968 DPL1YDR294C 1770 nt7.05□□□□□ -1.28
CDC40P40968 LEU4YNL104C 1860 nt7.04□□□□□ -1.28
CDC40P40968 AIM45YPR004C 1035 nt7.03□□□□□ -1.28
CDC40P40968 POP2YNR052C 1302 nt7.02□□□□□ -1.28
CDC40P40968 ITR2YOL103W 1830 nt7.02□□□□□ -1.29
CDC40P40968 MLS1YNL117W 1665 nt7.02□□□□□ -1.29
CDC40P40968 SEC61YLR378C 1443 nt7.01□□□□□ -1.29
CDC40P40968 NPP2YEL016C 1482 nt7.01□□□□□ -1.29
CDC40P40968 STF1YDL130W-A 261 nt7.01□□□□□ -1.29
CDC40P40968 OXA1YER154W 1209 nt7.01□□□□□ -1.29
CDC40P40968 ORT1YOR130C 879 nt7.01□□□□□ -1.29
CDC40P40968 FIT3YOR383C 615 nt7.01□□□□□ -1.29
CDC40P40968 VMA11YPL234C 495 nt7□□□□□ -1.29
CDC40P40968 snR4snR4 186 nt7□□□□□ -1.29
CDC40P40968 ALP1YNL270C 1722 nt6.99□□□□□ -1.29
CDC40P40968 NAS6YGR232W 687 nt6.98□□□□□ -1.29
CDC40P40968 RPS14BYJL191W 417 nt6.98□□□□□ -1.29
CDC40P40968 MET30YIL046W 1923 nt6.97□□□□□ -1.29
CDC40P40968 TRP2YER090W 1524 nt6.97□□□□□ -1.29
CDC40P40968 ENT4YLL038C 744 nt6.97□□□□□ -1.29
CDC40P40968 TIP1YBR067C 633 nt6.97□□□□□ -1.29
CDC40P40968 ADE16YLR028C 1776 nt6.97□□□□□ -1.29
CDC40P40968 HXT11YOL156W 1704 nt6.96□□□□□ -1.29
CDC40P40968 YNL190WYNL190W 615 nt6.96□□□□□ -1.3
CDC40P40968 TAT2YOL020W 1779 nt6.95□□□□□ -1.3
CDC40P40968 KRR1YCL059C 951 nt6.95□□□□□ -1.3
CDC40P40968 YER188WYER188W 720 nt6.95□□□□□ -1.3
CDC40P40968 SNX3YOR357C 489 nt6.94□□□□□ -1.3
CDC40P40968 UBP13YBL067C 2244 nt6.94□□□□□ -1.3
CDC40P40968 GLR1YPL091W 1452 nt6.93□□□□□ -1.3
CDC40P40968 tE(CUC)DtE(CUC)D 72 nt6.93□□□□□ -1.3
CDC40P40968 tE(CUC)ItE(CUC)I 72 nt6.93□□□□□ -1.3
CDC40P40968 YMR226CYMR226C 804 nt6.93□□□□□ -1.3
CDC40P40968 OSH7YHR001W 1314 nt6.93□□□□□ -1.3
CDC40P40968 FUB1YCR076C 753 nt6.92□□□□□ -1.3
CDC40P40968 HXT12YIL170W 1374 nt6.92□□□□□ -1.3
CDC40P40968 SRM1YGL097W 1449 nt6.92□□□□□ -1.3
CDC40P40968 LAS17YOR181W 1902 nt6.91□□□□□ -1.3
CDC40P40968 PAB1YER165W 1734 nt6.91□□□□□ -1.3
CDC40P40968 YDR467CYDR467C 327 nt6.9□□□□□ -1.3
CDC40P40968 TSC10YBR265W 963 nt6.9□□□□□ -1.3
CDC40P40968 BNI5YNL166C 1347 nt6.9□□□□□ -1.3
CDC40P40968 PFS2YNL317W 1398 nt6.9□□□□□ -1.31
CDC40P40968 HSV2YGR223C 1347 nt6.89□□□□□ -1.31
CDC40P40968 FTH1YBR207W 1398 nt6.87□□□□□ -1.31
CDC40P40968 ASP3-1YLR155C 1089 nt6.87□□□□□ -1.31
CDC40P40968 ASP3-2YLR157C 1089 nt6.87□□□□□ -1.31
CDC40P40968 ASP3-3YLR158C 1089 nt6.87□□□□□ -1.31
CDC40P40968 ASP3-4YLR160C 1089 nt6.87□□□□□ -1.31
CDC40P40968 MSC1YML128C 1542 nt6.86□□□□□ -1.31
CDC40P40968 AIM34YMR003W 597 nt6.86□□□□□ -1.31
CDC40P40968 SDH5YOL071W 489 nt6.85□□□□□ -1.31
CDC40P40968 SOL2YCR073W-A 948 nt6.84□□□□□ -1.31
CDC40P40968 EMC3YKL207W 762 nt6.84□□□□□ -1.31
CDC40P40968 YLR279WYLR279W 390 nt6.84□□□□□ -1.31
CDC40P40968 GPN2YOR262W 1044 nt6.84□□□□□ -1.31
CDC40P40968 RAD23YEL037C 1197 nt6.83□□□□□ -1.32
CDC40P40968 YGR012WYGR012W 1182 nt6.83□□□□□ -1.32
CDC40P40968 MET1YKR069W 1782 nt6.82□□□□□ -1.32
CDC40P40968 GND1YHR183W 1470 nt6.82□□□□□ -1.32
CDC40P40968 YDR455CYDR455C 309 nt6.82□□□□□ -1.32
CDC40P40968 DIA4YHR011W 1341 nt6.81□□□□□ -1.32
CDC40P40968 MDH2YOL126C 1134 nt6.81□□□□□ -1.32
CDC40P40968 AAT1YKL106W 1356 nt6.81□□□□□ -1.32
CDC40P40968 APT2YDR441C 546 nt6.8□□□□□ -1.32
CDC40P40968 RBG2YGR173W 1107 nt6.8□□□□□ -1.32
CDC40P40968 MSB4YOL112W 1479 nt6.79□□□□□ -1.32
CDC40P40968 SLM3YDL033C 1254 nt6.79□□□□□ -1.32
CDC40P40968 YMR210WYMR210W 1350 nt6.79□□□□□ -1.32
CDC40P40968 CCR4YAL021C 2514 nt6.78□□□□□ -1.32
CDC40P40968 ITR1YDR497C 1755 nt6.78□□□□□ -1.32
CDC40P40968 CHA1YCL064C 1083 nt6.78□□□□□ -1.32
CDC40P40968 YLR111WYLR111W 333 nt6.78□□□□□ -1.32
CDC40P40968 YBL095WYBL095W 813 nt6.78□□□□□ -1.32
Retrieved 100 of 7,029 protein–RNA pairs in 17.9 ms