Protein–RNA interactions for Protein: P35276

Rab3d, Ras-related protein Rab-3D, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab3dP35276 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rab3dP35276 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Rab3dP35276 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rab3dP35276 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC20.17■□□□□ 0.82
Rab3dP35276 Gm27322-201ENSMUST00000184007 104 ntBASIC20.17■□□□□ 0.82
Rab3dP35276 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Rab3dP35276 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
Rab3dP35276 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Rab3dP35276 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC20.16■□□□□ 0.82
Rab3dP35276 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC20.16■□□□□ 0.82
Rab3dP35276 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rab3dP35276 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rab3dP35276 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC20.15■□□□□ 0.82
Rab3dP35276 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rab3dP35276 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Rab3dP35276 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Rab3dP35276 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rab3dP35276 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC20.14■□□□□ 0.81
Rab3dP35276 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC20.12■□□□□ 0.81
Rab3dP35276 Gm17082-201ENSMUST00000166043 1091 ntBASIC20.12■□□□□ 0.81
Rab3dP35276 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rab3dP35276 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Rab3dP35276 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC20.1■□□□□ 0.81
Rab3dP35276 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rab3dP35276 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Rab3dP35276 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rab3dP35276 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rab3dP35276 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC20.06■□□□□ 0.8
Rab3dP35276 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rab3dP35276 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC20.06■□□□□ 0.8
Rab3dP35276 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC20.05■□□□□ 0.8
Rab3dP35276 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Rab3dP35276 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rab3dP35276 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rab3dP35276 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Rab3dP35276 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rab3dP35276 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Rab3dP35276 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rab3dP35276 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC20.03■□□□□ 0.8
Rab3dP35276 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Rab3dP35276 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Rab3dP35276 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC20.02■□□□□ 0.8
Rab3dP35276 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rab3dP35276 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Rab3dP35276 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Rab3dP35276 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Rab3dP35276 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rab3dP35276 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rab3dP35276 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rab3dP35276 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Rab3dP35276 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC20■□□□□ 0.79
Rab3dP35276 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC20■□□□□ 0.79
Rab3dP35276 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC20■□□□□ 0.79
Rab3dP35276 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rab3dP35276 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC19.99■□□□□ 0.79
Rab3dP35276 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rab3dP35276 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Rab3dP35276 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC19.98■□□□□ 0.79
Rab3dP35276 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Rab3dP35276 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Rab3dP35276 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rab3dP35276 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rab3dP35276 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC19.96■□□□□ 0.79
Rab3dP35276 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rab3dP35276 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rab3dP35276 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rab3dP35276 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rab3dP35276 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rab3dP35276 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Rab3dP35276 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rab3dP35276 Peli2-204ENSMUST00000226513 1320 ntBASIC19.93■□□□□ 0.78
Rab3dP35276 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rab3dP35276 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Rab3dP35276 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rab3dP35276 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rab3dP35276 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rab3dP35276 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Rab3dP35276 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Rab3dP35276 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rab3dP35276 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Rab3dP35276 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rab3dP35276 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rab3dP35276 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rab3dP35276 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Rab3dP35276 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rab3dP35276 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Rab3dP35276 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rab3dP35276 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rab3dP35276 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC19.88■□□□□ 0.77
Rab3dP35276 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Rab3dP35276 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rab3dP35276 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Rab3dP35276 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rab3dP35276 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rab3dP35276 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC19.87■□□□□ 0.77
Rab3dP35276 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rab3dP35276 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rab3dP35276 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rab3dP35276 Pcf11-205ENSMUST00000208255 1720 ntBASIC19.86■□□□□ 0.77
Rab3dP35276 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms