Protein–RNA interactions for Protein: O88545

Cops6, COP9 signalosome complex subunit 6, mousemouse

Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops6O88545 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
Cops6O88545 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC30.45■■■□□ 2.47
Cops6O88545 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC30.45■■■□□ 2.46
Cops6O88545 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.46
Cops6O88545 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
Cops6O88545 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
Cops6O88545 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
Cops6O88545 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC30.41■■■□□ 2.46
Cops6O88545 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
Cops6O88545 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC30.4■■■□□ 2.46
Cops6O88545 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
Cops6O88545 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
Cops6O88545 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC30.38■■■□□ 2.45
Cops6O88545 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC30.37■■■□□ 2.45
Cops6O88545 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC30.37■■■□□ 2.45
Cops6O88545 Gm7432-201ENSMUST00000210343 879 ntBASIC30.37■■■□□ 2.45
Cops6O88545 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC30.37■■■□□ 2.45
Cops6O88545 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
Cops6O88545 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC30.36■■■□□ 2.45
Cops6O88545 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
Cops6O88545 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
Cops6O88545 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC30.33■■■□□ 2.45
Cops6O88545 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC30.32■■■□□ 2.44
Cops6O88545 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC30.32■■■□□ 2.44
Cops6O88545 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC30.31■■■□□ 2.44
Cops6O88545 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
Cops6O88545 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
Cops6O88545 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC30.28■■■□□ 2.44
Cops6O88545 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC30.28■■■□□ 2.44
Cops6O88545 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
Cops6O88545 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC30.26■■■□□ 2.44
Cops6O88545 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC30.26■■■□□ 2.43
Cops6O88545 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC30.25■■■□□ 2.43
Cops6O88545 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
Cops6O88545 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
Cops6O88545 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC30.23■■■□□ 2.43
Cops6O88545 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
Cops6O88545 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC30.21■■■□□ 2.43
Cops6O88545 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC30.21■■■□□ 2.43
Cops6O88545 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC30.2■■■□□ 2.43
Cops6O88545 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC30.19■■■□□ 2.42
Cops6O88545 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC30.19■■■□□ 2.42
Cops6O88545 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC30.19■■■□□ 2.42
Cops6O88545 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
Cops6O88545 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
Cops6O88545 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
Cops6O88545 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC30.16■■■□□ 2.42
Cops6O88545 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC30.16■■■□□ 2.42
Cops6O88545 Gm11599-201ENSMUST00000118720 878 ntBASIC30.16■■■□□ 2.42
Cops6O88545 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC30.16■■■□□ 2.42
Cops6O88545 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
Cops6O88545 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
Cops6O88545 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC30.15■■■□□ 2.42
Cops6O88545 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC30.15■■■□□ 2.42
Cops6O88545 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
Cops6O88545 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC30.15■■■□□ 2.42
Cops6O88545 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
Cops6O88545 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
Cops6O88545 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC30.14■■■□□ 2.41
Cops6O88545 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC30.13■■■□□ 2.41
Cops6O88545 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC30.13■■■□□ 2.41
Cops6O88545 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC30.12■■■□□ 2.41
Cops6O88545 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC30.12■■■□□ 2.41
Cops6O88545 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC30.11■■■□□ 2.41
Cops6O88545 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
Cops6O88545 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
Cops6O88545 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
Cops6O88545 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
Cops6O88545 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC30.1■■■□□ 2.41
Cops6O88545 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
Cops6O88545 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC30.08■■■□□ 2.41
Cops6O88545 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
Cops6O88545 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC30.08■■■□□ 2.41
Cops6O88545 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC30.08■■■□□ 2.41
Cops6O88545 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC30.07■■■□□ 2.41
Cops6O88545 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
Cops6O88545 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC30.07■■■□□ 2.4
Cops6O88545 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
Cops6O88545 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
Cops6O88545 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC30.03■■■□□ 2.4
Cops6O88545 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
Cops6O88545 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
Cops6O88545 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC30.02■■■□□ 2.4
Cops6O88545 Gm30023-201ENSMUST00000197970 889 ntBASIC30.02■■■□□ 2.4
Cops6O88545 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC30.02■■■□□ 2.4
Cops6O88545 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC30.01■■■□□ 2.39
Cops6O88545 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC30.01■■■□□ 2.39
Cops6O88545 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
Cops6O88545 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC29.99■■■□□ 2.39
Cops6O88545 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC29.99■■■□□ 2.39
Cops6O88545 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC29.97■■■□□ 2.39
Cops6O88545 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
Cops6O88545 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
Cops6O88545 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
Cops6O88545 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC29.94■■■□□ 2.38
Cops6O88545 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC29.94■■■□□ 2.38
Cops6O88545 Pcf11-205ENSMUST00000208255 1720 ntBASIC29.93■■■□□ 2.38
Cops6O88545 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC29.93■■■□□ 2.38
Cops6O88545 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC29.93■■■□□ 2.38
Cops6O88545 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC29.93■■■□□ 2.38
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms