Protein–RNA interactions for Protein: O88346

Tnnt1, Troponin T, slow skeletal muscle, mousemouse

Predictions only

Length 262 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnnt1O88346 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC31.4■■■□□ 2.62
Tnnt1O88346 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC31.39■■■□□ 2.62
Tnnt1O88346 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC31.38■■■□□ 2.61
Tnnt1O88346 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC31.38■■■□□ 2.61
Tnnt1O88346 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
Tnnt1O88346 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
Tnnt1O88346 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
Tnnt1O88346 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
Tnnt1O88346 AC153504.1-201ENSMUST00000218379 2290 ntBASIC31.35■■■□□ 2.61
Tnnt1O88346 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
Tnnt1O88346 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC31.34■■■□□ 2.61
Tnnt1O88346 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC31.34■■■□□ 2.61
Tnnt1O88346 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
Tnnt1O88346 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
Tnnt1O88346 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC31.3■■■□□ 2.6
Tnnt1O88346 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC31.29■■■□□ 2.6
Tnnt1O88346 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC31.29■■■□□ 2.6
Tnnt1O88346 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC31.28■■■□□ 2.6
Tnnt1O88346 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC31.27■■■□□ 2.6
Tnnt1O88346 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
Tnnt1O88346 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC31.26■■■□□ 2.59
Tnnt1O88346 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC31.25■■■□□ 2.59
Tnnt1O88346 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
Tnnt1O88346 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
Tnnt1O88346 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
Tnnt1O88346 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
Tnnt1O88346 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
Tnnt1O88346 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
Tnnt1O88346 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC31.2■■■□□ 2.59
Tnnt1O88346 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC31.2■■■□□ 2.59
Tnnt1O88346 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC31.2■■■□□ 2.58
Tnnt1O88346 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC31.19■■■□□ 2.58
Tnnt1O88346 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC31.19■■■□□ 2.58
Tnnt1O88346 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
Tnnt1O88346 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC31.18■■■□□ 2.58
Tnnt1O88346 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
Tnnt1O88346 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC31.16■■■□□ 2.58
Tnnt1O88346 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC31.16■■■□□ 2.58
Tnnt1O88346 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
Tnnt1O88346 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC31.14■■■□□ 2.58
Tnnt1O88346 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
Tnnt1O88346 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC31.13■■■□□ 2.57
Tnnt1O88346 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC31.13■■■□□ 2.57
Tnnt1O88346 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
Tnnt1O88346 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC31.12■■■□□ 2.57
Tnnt1O88346 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
Tnnt1O88346 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
Tnnt1O88346 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
Tnnt1O88346 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
Tnnt1O88346 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
Tnnt1O88346 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC31.08■■■□□ 2.57
Tnnt1O88346 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC31.08■■■□□ 2.57
Tnnt1O88346 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC31.08■■■□□ 2.57
Tnnt1O88346 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
Tnnt1O88346 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
Tnnt1O88346 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
Tnnt1O88346 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC31.05■■■□□ 2.56
Tnnt1O88346 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC31.04■■■□□ 2.56
Tnnt1O88346 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC31.04■■■□□ 2.56
Tnnt1O88346 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
Tnnt1O88346 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
Tnnt1O88346 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
Tnnt1O88346 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC31.03■■■□□ 2.56
Tnnt1O88346 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
Tnnt1O88346 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC31.03■■■□□ 2.56
Tnnt1O88346 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC31.02■■■□□ 2.56
Tnnt1O88346 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC31.02■■■□□ 2.56
Tnnt1O88346 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC31.01■■■□□ 2.56
Tnnt1O88346 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
Tnnt1O88346 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC31.01■■■□□ 2.55
Tnnt1O88346 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC31■■■□□ 2.55
Tnnt1O88346 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC31■■■□□ 2.55
Tnnt1O88346 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC31■■■□□ 2.55
Tnnt1O88346 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC30.99■■■□□ 2.55
Tnnt1O88346 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC30.99■■■□□ 2.55
Tnnt1O88346 Zxda-201ENSMUST00000117281 2621 ntBASIC30.99■■■□□ 2.55
Tnnt1O88346 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
Tnnt1O88346 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC30.98■■■□□ 2.55
Tnnt1O88346 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
Tnnt1O88346 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
Tnnt1O88346 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
Tnnt1O88346 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
Tnnt1O88346 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC30.96■■■□□ 2.55
Tnnt1O88346 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
Tnnt1O88346 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC30.96■■■□□ 2.55
Tnnt1O88346 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
Tnnt1O88346 Gm7432-201ENSMUST00000210343 879 ntBASIC30.95■■■□□ 2.55
Tnnt1O88346 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC30.95■■■□□ 2.54
Tnnt1O88346 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC30.93■■■□□ 2.54
Tnnt1O88346 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
Tnnt1O88346 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC30.92■■■□□ 2.54
Tnnt1O88346 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC30.9■■■□□ 2.54
Tnnt1O88346 Gm30023-201ENSMUST00000197970 889 ntBASIC30.9■■■□□ 2.54
Tnnt1O88346 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC30.9■■■□□ 2.54
Tnnt1O88346 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC30.9■■■□□ 2.54
Tnnt1O88346 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC30.88■■■□□ 2.53
Tnnt1O88346 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC30.88■■■□□ 2.53
Tnnt1O88346 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC30.88■■■□□ 2.53
Tnnt1O88346 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC30.87■■■□□ 2.53
Tnnt1O88346 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC30.86■■■□□ 2.53
Retrieved 100 of 76,532 protein–RNA pairs in 14.5 ms