Protein–RNA interactions for Protein: O70237

Gfi1b, Zinc finger protein Gfi-1b, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gfi1bO70237 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Gfi1bO70237 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Gfi1bO70237 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Gfi1bO70237 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Gfi1bO70237 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Gfi1bO70237 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC19.97■□□□□ 0.79
Gfi1bO70237 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Gfi1bO70237 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Gfi1bO70237 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Gfi1bO70237 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Gfi1bO70237 Peli2-204ENSMUST00000226513 1320 ntBASIC19.96■□□□□ 0.79
Gfi1bO70237 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Gfi1bO70237 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC19.95■□□□□ 0.78
Gfi1bO70237 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Gfi1bO70237 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Gfi1bO70237 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Gfi1bO70237 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Gfi1bO70237 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC19.93■□□□□ 0.78
Gfi1bO70237 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Gfi1bO70237 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Gfi1bO70237 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Gfi1bO70237 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Gfi1bO70237 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC19.92■□□□□ 0.78
Gfi1bO70237 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Gfi1bO70237 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Gfi1bO70237 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Gfi1bO70237 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Gfi1bO70237 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Gfi1bO70237 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Gfi1bO70237 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Gfi1bO70237 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Gfi1bO70237 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Gfi1bO70237 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Gfi1bO70237 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC19.9■□□□□ 0.78
Gfi1bO70237 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Gfi1bO70237 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Gfi1bO70237 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC19.9■□□□□ 0.78
Gfi1bO70237 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Gfi1bO70237 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Gfi1bO70237 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Gfi1bO70237 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Gfi1bO70237 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Gfi1bO70237 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
Gfi1bO70237 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Gfi1bO70237 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Gfi1bO70237 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Gfi1bO70237 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Gfi1bO70237 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC19.87■□□□□ 0.77
Gfi1bO70237 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Gfi1bO70237 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Gfi1bO70237 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Gfi1bO70237 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Gfi1bO70237 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Gfi1bO70237 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Gfi1bO70237 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Gfi1bO70237 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Gfi1bO70237 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Gfi1bO70237 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Gfi1bO70237 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Gfi1bO70237 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Gfi1bO70237 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Gfi1bO70237 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Gfi1bO70237 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Gfi1bO70237 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Gfi1bO70237 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Gfi1bO70237 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Gfi1bO70237 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Gfi1bO70237 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Gfi1bO70237 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC19.8■□□□□ 0.76
Gfi1bO70237 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Gfi1bO70237 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Gfi1bO70237 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Gfi1bO70237 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Gfi1bO70237 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Gfi1bO70237 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Gfi1bO70237 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Gfi1bO70237 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Gfi1bO70237 Gm16148-201ENSMUST00000119653 893 ntBASIC19.79■□□□□ 0.76
Gfi1bO70237 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Gfi1bO70237 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Gfi1bO70237 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Gfi1bO70237 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC19.78■□□□□ 0.76
Gfi1bO70237 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Gfi1bO70237 Gm30346-201ENSMUST00000218641 1699 ntBASIC19.78■□□□□ 0.76
Gfi1bO70237 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Gfi1bO70237 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Gfi1bO70237 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC19.76■□□□□ 0.75
Gfi1bO70237 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Gfi1bO70237 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Gfi1bO70237 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Gfi1bO70237 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Gfi1bO70237 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Gfi1bO70237 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Gfi1bO70237 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Gfi1bO70237 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Gfi1bO70237 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Gfi1bO70237 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Gfi1bO70237 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gfi1bO70237 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gfi1bO70237 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 53.2 ms