Protein–RNA interactions for Protein: O70228

Atp9a, Probable phospholipid-transporting ATPase IIA, mousemouse

Predictions only

Length 1,047 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp9aO70228 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
Atp9aO70228 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
Atp9aO70228 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
Atp9aO70228 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
Atp9aO70228 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC27.42■■□□□ 1.98
Atp9aO70228 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC27.41■■□□□ 1.98
Atp9aO70228 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC27.41■■□□□ 1.98
Atp9aO70228 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC27.4■■□□□ 1.98
Atp9aO70228 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
Atp9aO70228 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC27.39■■□□□ 1.98
Atp9aO70228 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
Atp9aO70228 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
Atp9aO70228 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
Atp9aO70228 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC27.36■■□□□ 1.97
Atp9aO70228 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC27.34■■□□□ 1.97
Atp9aO70228 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC27.34■■□□□ 1.97
Atp9aO70228 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
Atp9aO70228 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
Atp9aO70228 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
Atp9aO70228 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC27.33■■□□□ 1.97
Atp9aO70228 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC27.32■■□□□ 1.96
Atp9aO70228 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
Atp9aO70228 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
Atp9aO70228 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC27.3■■□□□ 1.96
Atp9aO70228 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC27.3■■□□□ 1.96
Atp9aO70228 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
Atp9aO70228 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
Atp9aO70228 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC27.28■■□□□ 1.96
Atp9aO70228 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
Atp9aO70228 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
Atp9aO70228 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
Atp9aO70228 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
Atp9aO70228 Zxda-201ENSMUST00000117281 2621 ntBASIC27.25■■□□□ 1.95
Atp9aO70228 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
Atp9aO70228 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC27.25■■□□□ 1.95
Atp9aO70228 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
Atp9aO70228 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC27.25■■□□□ 1.95
Atp9aO70228 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC27.25■■□□□ 1.95
Atp9aO70228 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
Atp9aO70228 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC27.24■■□□□ 1.95
Atp9aO70228 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
Atp9aO70228 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC27.23■■□□□ 1.95
Atp9aO70228 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
Atp9aO70228 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC27.23■■□□□ 1.95
Atp9aO70228 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC27.23■■□□□ 1.95
Atp9aO70228 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
Atp9aO70228 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
Atp9aO70228 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC27.23■■□□□ 1.95
Atp9aO70228 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
Atp9aO70228 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC27.21■■□□□ 1.95
Atp9aO70228 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Atp9aO70228 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.95
Atp9aO70228 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC27.2■■□□□ 1.94
Atp9aO70228 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC27.19■■□□□ 1.94
Atp9aO70228 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC27.19■■□□□ 1.94
Atp9aO70228 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
Atp9aO70228 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC27.17■■□□□ 1.94
Atp9aO70228 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
Atp9aO70228 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC27.16■■□□□ 1.94
Atp9aO70228 Gm5987-201ENSMUST00000196433 1151 ntBASIC27.15■■□□□ 1.94
Atp9aO70228 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC27.14■■□□□ 1.94
Atp9aO70228 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
Atp9aO70228 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
Atp9aO70228 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
Atp9aO70228 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC27.14■■□□□ 1.94
Atp9aO70228 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.93
Atp9aO70228 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
Atp9aO70228 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
Atp9aO70228 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC27.13■■□□□ 1.93
Atp9aO70228 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
Atp9aO70228 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
Atp9aO70228 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
Atp9aO70228 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
Atp9aO70228 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC27.11■■□□□ 1.93
Atp9aO70228 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC27.11■■□□□ 1.93
Atp9aO70228 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC27.11■■□□□ 1.93
Atp9aO70228 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
Atp9aO70228 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC27.09■■□□□ 1.93
Atp9aO70228 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC27.09■■□□□ 1.93
Atp9aO70228 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC27.08■■□□□ 1.93
Atp9aO70228 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC27.08■■□□□ 1.92
Atp9aO70228 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC27.07■■□□□ 1.92
Atp9aO70228 Gm43445-201ENSMUST00000198564 2091 ntBASIC27.05■■□□□ 1.92
Atp9aO70228 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC27.05■■□□□ 1.92
Atp9aO70228 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
Atp9aO70228 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC27.04■■□□□ 1.92
Atp9aO70228 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
Atp9aO70228 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
Atp9aO70228 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC27.02■■□□□ 1.92
Atp9aO70228 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC27.01■■□□□ 1.92
Atp9aO70228 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC27.01■■□□□ 1.91
Atp9aO70228 Gm30023-201ENSMUST00000197970 889 ntBASIC27.01■■□□□ 1.91
Atp9aO70228 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
Atp9aO70228 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC27■■□□□ 1.91
Atp9aO70228 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC27■■□□□ 1.91
Atp9aO70228 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC27■■□□□ 1.91
Atp9aO70228 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC27■■□□□ 1.91
Atp9aO70228 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC26.99■■□□□ 1.91
Atp9aO70228 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
Atp9aO70228 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
Retrieved 100 of 76,532 protein–RNA pairs in 72 ms