Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC27.57■■■□□ 2
Trdmt1O55055 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC27.56■■■□□ 2
Trdmt1O55055 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC27.56■■■□□ 2
Trdmt1O55055 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC27.55■■■□□ 2
Trdmt1O55055 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC27.55■■■□□ 2
Trdmt1O55055 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC27.54■■■□□ 2
Trdmt1O55055 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC27.54■■■□□ 2
Trdmt1O55055 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
Trdmt1O55055 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC27.53■■■□□ 2
Trdmt1O55055 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
Trdmt1O55055 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
Trdmt1O55055 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC27.51■■□□□ 1.99
Trdmt1O55055 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
Trdmt1O55055 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
Trdmt1O55055 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
Trdmt1O55055 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC27.49■■□□□ 1.99
Trdmt1O55055 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
Trdmt1O55055 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
Trdmt1O55055 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
Trdmt1O55055 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC27.48■■□□□ 1.99
Trdmt1O55055 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC27.48■■□□□ 1.99
Trdmt1O55055 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
Trdmt1O55055 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
Trdmt1O55055 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC27.45■■□□□ 1.99
Trdmt1O55055 Gm6345-201ENSMUST00000180378 1691 ntBASIC27.45■■□□□ 1.98
Trdmt1O55055 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
Trdmt1O55055 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
Trdmt1O55055 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC27.44■■□□□ 1.98
Trdmt1O55055 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
Trdmt1O55055 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC27.42■■□□□ 1.98
Trdmt1O55055 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC27.41■■□□□ 1.98
Trdmt1O55055 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
Trdmt1O55055 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC27.41■■□□□ 1.98
Trdmt1O55055 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
Trdmt1O55055 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
Trdmt1O55055 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC27.4■■□□□ 1.98
Trdmt1O55055 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC27.39■■□□□ 1.98
Trdmt1O55055 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
Trdmt1O55055 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC27.39■■□□□ 1.97
Trdmt1O55055 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
Trdmt1O55055 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
Trdmt1O55055 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC27.37■■□□□ 1.97
Trdmt1O55055 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
Trdmt1O55055 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC27.36■■□□□ 1.97
Trdmt1O55055 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC27.36■■□□□ 1.97
Trdmt1O55055 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC27.36■■□□□ 1.97
Trdmt1O55055 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC27.35■■□□□ 1.97
Trdmt1O55055 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
Trdmt1O55055 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC27.34■■□□□ 1.97
Trdmt1O55055 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC27.33■■□□□ 1.97
Trdmt1O55055 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC27.33■■□□□ 1.97
Trdmt1O55055 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
Trdmt1O55055 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
Trdmt1O55055 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
Trdmt1O55055 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
Trdmt1O55055 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC27.3■■□□□ 1.96
Trdmt1O55055 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
Trdmt1O55055 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
Trdmt1O55055 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC27.26■■□□□ 1.95
Trdmt1O55055 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC27.26■■□□□ 1.95
Trdmt1O55055 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC27.26■■□□□ 1.95
Trdmt1O55055 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC27.25■■□□□ 1.95
Trdmt1O55055 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC27.25■■□□□ 1.95
Trdmt1O55055 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
Trdmt1O55055 AC131739.1-201ENSMUST00000221692 1245 ntBASIC27.24■■□□□ 1.95
Trdmt1O55055 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
Trdmt1O55055 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC27.21■■□□□ 1.95
Trdmt1O55055 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.95
Trdmt1O55055 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.95
Trdmt1O55055 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC27.2■■□□□ 1.94
Trdmt1O55055 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC27.2■■□□□ 1.94
Trdmt1O55055 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
Trdmt1O55055 Gm11175-201ENSMUST00000116172 543 ntBASIC27.19■■□□□ 1.94
Trdmt1O55055 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
Trdmt1O55055 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
Trdmt1O55055 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
Trdmt1O55055 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Trdmt1O55055 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
Trdmt1O55055 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC27.17■■□□□ 1.94
Trdmt1O55055 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC27.17■■□□□ 1.94
Trdmt1O55055 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Trdmt1O55055 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC27.17■■□□□ 1.94
Trdmt1O55055 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
Trdmt1O55055 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
Trdmt1O55055 Gm30023-201ENSMUST00000197970 889 ntBASIC27.16■■□□□ 1.94
Trdmt1O55055 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC27.15■■□□□ 1.94
Trdmt1O55055 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
Trdmt1O55055 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
Trdmt1O55055 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
Trdmt1O55055 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC27.14■■□□□ 1.94
Trdmt1O55055 Mir6538-201ENSMUST00000183713 110 ntBASIC27.13■■□□□ 1.93
Trdmt1O55055 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
Trdmt1O55055 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
Trdmt1O55055 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC27.11■■□□□ 1.93
Trdmt1O55055 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC27.11■■□□□ 1.93
Trdmt1O55055 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
Trdmt1O55055 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
Trdmt1O55055 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC27.11■■□□□ 1.93
Trdmt1O55055 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
Trdmt1O55055 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
Retrieved 100 of 76,532 protein–RNA pairs in 109.3 ms