Protein–RNA interactions for Protein: O35701

Matn3, Matrilin-3, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn3O35701 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
Matn3O35701 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC22■■□□□ 1.11
Matn3O35701 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Matn3O35701 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Matn3O35701 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Matn3O35701 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Matn3O35701 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Matn3O35701 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
Matn3O35701 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
Matn3O35701 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Matn3O35701 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Matn3O35701 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
Matn3O35701 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Matn3O35701 Gm17082-201ENSMUST00000166043 1091 ntBASIC21.96■■□□□ 1.11
Matn3O35701 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Matn3O35701 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Matn3O35701 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Matn3O35701 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC21.94■■□□□ 1.1
Matn3O35701 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC21.93■■□□□ 1.1
Matn3O35701 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Matn3O35701 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Matn3O35701 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Matn3O35701 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
Matn3O35701 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Matn3O35701 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Matn3O35701 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Matn3O35701 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Matn3O35701 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Matn3O35701 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC21.87■■□□□ 1.09
Matn3O35701 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Matn3O35701 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
Matn3O35701 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Matn3O35701 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Matn3O35701 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Matn3O35701 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
Matn3O35701 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Matn3O35701 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Matn3O35701 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Matn3O35701 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Matn3O35701 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC21.82■■□□□ 1.08
Matn3O35701 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC21.82■■□□□ 1.08
Matn3O35701 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Matn3O35701 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Matn3O35701 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Matn3O35701 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Matn3O35701 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Matn3O35701 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Matn3O35701 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Matn3O35701 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
Matn3O35701 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Matn3O35701 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
Matn3O35701 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
Matn3O35701 Gm27322-201ENSMUST00000184007 104 ntBASIC21.79■■□□□ 1.08
Matn3O35701 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC21.79■■□□□ 1.08
Matn3O35701 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Matn3O35701 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC21.78■■□□□ 1.08
Matn3O35701 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Matn3O35701 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC21.78■■□□□ 1.08
Matn3O35701 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC21.77■■□□□ 1.08
Matn3O35701 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Matn3O35701 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Matn3O35701 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Matn3O35701 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC21.76■■□□□ 1.07
Matn3O35701 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Matn3O35701 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Matn3O35701 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Matn3O35701 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Matn3O35701 Il17rd-202ENSMUST00000223942 2186 ntBASIC21.74■■□□□ 1.07
Matn3O35701 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Matn3O35701 AC122428.3-201ENSMUST00000215551 2290 ntBASIC21.72■■□□□ 1.07
Matn3O35701 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
Matn3O35701 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC21.71■■□□□ 1.07
Matn3O35701 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Matn3O35701 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
Matn3O35701 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Matn3O35701 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Matn3O35701 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Matn3O35701 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
Matn3O35701 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Matn3O35701 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Matn3O35701 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Matn3O35701 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
Matn3O35701 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
Matn3O35701 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Matn3O35701 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Matn3O35701 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
Matn3O35701 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Matn3O35701 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Matn3O35701 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC21.66■■□□□ 1.06
Matn3O35701 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Matn3O35701 Gm17641-201ENSMUST00000166328 2350 ntBASIC21.66■■□□□ 1.06
Matn3O35701 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC21.66■■□□□ 1.06
Matn3O35701 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Matn3O35701 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Matn3O35701 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Matn3O35701 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Matn3O35701 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Matn3O35701 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Matn3O35701 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
Matn3O35701 Gm24804-201ENSMUST00000174982 85 ntBASIC21.64■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms