Protein–RNA interactions for Protein: J3QPF1

Gm10553, Predicted gene 10553, mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10553J3QPF1 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Gm10553J3QPF1 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Gm10553J3QPF1 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Gm10553J3QPF1 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Gm10553J3QPF1 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Gm10553J3QPF1 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Gm10553J3QPF1 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Gm10553J3QPF1 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC18.6■□□□□ 0.57
Gm10553J3QPF1 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
Gm10553J3QPF1 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC18.6■□□□□ 0.57
Gm10553J3QPF1 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Gm10553J3QPF1 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Gm10553J3QPF1 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Gm10553J3QPF1 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Gm10553J3QPF1 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Gm10553J3QPF1 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Gm10553J3QPF1 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Gm10553J3QPF1 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Gm10553J3QPF1 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Gm10553J3QPF1 Gm9905-201ENSMUST00000065740 1845 ntBASIC18.56■□□□□ 0.56
Gm10553J3QPF1 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Gm10553J3QPF1 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Gm10553J3QPF1 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Gm10553J3QPF1 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Gm10553J3QPF1 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Gm10553J3QPF1 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Gm10553J3QPF1 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Gm10553J3QPF1 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Gm10553J3QPF1 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Gm10553J3QPF1 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gm10553J3QPF1 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Gm10553J3QPF1 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC18.53■□□□□ 0.56
Gm10553J3QPF1 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Gm10553J3QPF1 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Gm10553J3QPF1 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC18.52■□□□□ 0.56
Gm10553J3QPF1 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Gm10553J3QPF1 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Gm10553J3QPF1 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Gm10553J3QPF1 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Gm10553J3QPF1 Gm9939-201ENSMUST00000067161 1154 ntBASIC18.52■□□□□ 0.56
Gm10553J3QPF1 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Gm10553J3QPF1 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Gm10553J3QPF1 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Gm10553J3QPF1 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Gm10553J3QPF1 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Gm10553J3QPF1 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Gm10553J3QPF1 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC18.51■□□□□ 0.55
Gm10553J3QPF1 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Gm10553J3QPF1 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Gm10553J3QPF1 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Gm10553J3QPF1 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Gm10553J3QPF1 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Gm10553J3QPF1 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Gm10553J3QPF1 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Gm10553J3QPF1 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Gm10553J3QPF1 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
Gm10553J3QPF1 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC18.48■□□□□ 0.55
Gm10553J3QPF1 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Gm10553J3QPF1 Amer2-203ENSMUST00000225247 2662 ntBASIC18.47■□□□□ 0.55
Gm10553J3QPF1 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Gm10553J3QPF1 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Gm10553J3QPF1 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Gm10553J3QPF1 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC18.44■□□□□ 0.54
Gm10553J3QPF1 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Gm10553J3QPF1 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Gm10553J3QPF1 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Gm10553J3QPF1 Gm6821-201ENSMUST00000107540 542 ntBASIC18.43■□□□□ 0.54
Gm10553J3QPF1 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
Gm10553J3QPF1 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Gm10553J3QPF1 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Gm10553J3QPF1 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Gm10553J3QPF1 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Gm10553J3QPF1 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Gm10553J3QPF1 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC18.41■□□□□ 0.54
Gm10553J3QPF1 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Gm10553J3QPF1 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Gm10553J3QPF1 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Gm10553J3QPF1 Gm42809-201ENSMUST00000198429 1138 ntBASIC18.4■□□□□ 0.54
Gm10553J3QPF1 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC18.4■□□□□ 0.54
Gm10553J3QPF1 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Gm10553J3QPF1 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC18.39■□□□□ 0.54
Gm10553J3QPF1 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Gm10553J3QPF1 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Gm10553J3QPF1 Nkain2-201ENSMUST00000092602 558 ntBASIC18.39■□□□□ 0.53
Gm10553J3QPF1 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Gm10553J3QPF1 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Gm10553J3QPF1 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Gm10553J3QPF1 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Gm10553J3QPF1 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Gm10553J3QPF1 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC18.37■□□□□ 0.53
Gm10553J3QPF1 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
Gm10553J3QPF1 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Gm10553J3QPF1 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Gm10553J3QPF1 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Gm10553J3QPF1 Pcf11-205ENSMUST00000208255 1720 ntBASIC18.35■□□□□ 0.53
Gm10553J3QPF1 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Gm10553J3QPF1 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Gm10553J3QPF1 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Gm10553J3QPF1 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Gm10553J3QPF1 Gm8503-201ENSMUST00000118131 455 ntBASIC18.32■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms