Protein–RNA interactions for Protein: H3BJZ2

Cdhr4, Cadherin-related family member 4, mousemouse

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr4H3BJZ2 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Cdhr4H3BJZ2 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Cdhr4H3BJZ2 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Cdhr4H3BJZ2 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Cdhr4H3BJZ2 Nkain2-201ENSMUST00000092602 558 ntBASIC21.5■■□□□ 1.03
Cdhr4H3BJZ2 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
Cdhr4H3BJZ2 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Cdhr4H3BJZ2 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Cdhr4H3BJZ2 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Cdhr4H3BJZ2 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
Cdhr4H3BJZ2 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Cdhr4H3BJZ2 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC21.48■■□□□ 1.03
Cdhr4H3BJZ2 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
Cdhr4H3BJZ2 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Cdhr4H3BJZ2 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
Cdhr4H3BJZ2 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Cdhr4H3BJZ2 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC21.45■■□□□ 1.02
Cdhr4H3BJZ2 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Cdhr4H3BJZ2 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Cdhr4H3BJZ2 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC21.43■■□□□ 1.02
Cdhr4H3BJZ2 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Cdhr4H3BJZ2 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Cdhr4H3BJZ2 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC21.43■■□□□ 1.02
Cdhr4H3BJZ2 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC21.42■■□□□ 1.02
Cdhr4H3BJZ2 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC21.42■■□□□ 1.02
Cdhr4H3BJZ2 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Cdhr4H3BJZ2 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Cdhr4H3BJZ2 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC21.41■■□□□ 1.02
Cdhr4H3BJZ2 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Cdhr4H3BJZ2 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Cdhr4H3BJZ2 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
Cdhr4H3BJZ2 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
Cdhr4H3BJZ2 Zxda-201ENSMUST00000117281 2621 ntBASIC21.39■■□□□ 1.01
Cdhr4H3BJZ2 Gm6345-201ENSMUST00000180378 1691 ntBASIC21.38■■□□□ 1.01
Cdhr4H3BJZ2 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Cdhr4H3BJZ2 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Cdhr4H3BJZ2 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC21.37■■□□□ 1.01
Cdhr4H3BJZ2 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Cdhr4H3BJZ2 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Cdhr4H3BJZ2 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Cdhr4H3BJZ2 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Cdhr4H3BJZ2 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
Cdhr4H3BJZ2 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
Cdhr4H3BJZ2 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC21.35■■□□□ 1.01
Cdhr4H3BJZ2 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Cdhr4H3BJZ2 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Cdhr4H3BJZ2 Gm9905-201ENSMUST00000065740 1845 ntBASIC21.34■■□□□ 1.01
Cdhr4H3BJZ2 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Cdhr4H3BJZ2 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC21.32■■□□□ 1
Cdhr4H3BJZ2 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC21.32■■□□□ 1
Cdhr4H3BJZ2 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC21.32■■□□□ 1
Cdhr4H3BJZ2 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC21.31■■□□□ 1
Cdhr4H3BJZ2 Gm6206-201ENSMUST00000133472 2199 ntBASIC21.31■■□□□ 1
Cdhr4H3BJZ2 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC21.31■■□□□ 1
Cdhr4H3BJZ2 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC21.3■■□□□ 1
Cdhr4H3BJZ2 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC21.3■■□□□ 1
Cdhr4H3BJZ2 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Cdhr4H3BJZ2 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC21.28■■□□□ 1
Cdhr4H3BJZ2 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC21.28■■□□□ 1
Cdhr4H3BJZ2 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Cdhr4H3BJZ2 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Cdhr4H3BJZ2 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC21.27■■□□□ 1
Cdhr4H3BJZ2 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Cdhr4H3BJZ2 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cdhr4H3BJZ2 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Cdhr4H3BJZ2 Gm43445-201ENSMUST00000198564 2091 ntBASIC21.24■□□□□ 0.99
Cdhr4H3BJZ2 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Cdhr4H3BJZ2 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Cdhr4H3BJZ2 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC21.23■□□□□ 0.99
Cdhr4H3BJZ2 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC21.23■□□□□ 0.99
Cdhr4H3BJZ2 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cdhr4H3BJZ2 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cdhr4H3BJZ2 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC21.21■□□□□ 0.99
Cdhr4H3BJZ2 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
Cdhr4H3BJZ2 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Cdhr4H3BJZ2 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Cdhr4H3BJZ2 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cdhr4H3BJZ2 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cdhr4H3BJZ2 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cdhr4H3BJZ2 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC21.19■□□□□ 0.98
Cdhr4H3BJZ2 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cdhr4H3BJZ2 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cdhr4H3BJZ2 Gm7432-201ENSMUST00000210343 879 ntBASIC21.17■□□□□ 0.98
Cdhr4H3BJZ2 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC21.17■□□□□ 0.98
Cdhr4H3BJZ2 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Cdhr4H3BJZ2 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Cdhr4H3BJZ2 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Cdhr4H3BJZ2 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cdhr4H3BJZ2 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cdhr4H3BJZ2 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC21.14■□□□□ 0.98
Cdhr4H3BJZ2 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC21.14■□□□□ 0.97
Cdhr4H3BJZ2 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC21.14■□□□□ 0.97
Cdhr4H3BJZ2 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Cdhr4H3BJZ2 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cdhr4H3BJZ2 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cdhr4H3BJZ2 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Cdhr4H3BJZ2 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Cdhr4H3BJZ2 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Cdhr4H3BJZ2 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Cdhr4H3BJZ2 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 240.8 ms