Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
Ube4aE9Q735 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC30.04■■■□□ 2.4
Ube4aE9Q735 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
Ube4aE9Q735 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
Ube4aE9Q735 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC30.04■■■□□ 2.4
Ube4aE9Q735 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
Ube4aE9Q735 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
Ube4aE9Q735 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC30.03■■■□□ 2.4
Ube4aE9Q735 Gm7432-201ENSMUST00000210343 879 ntBASIC30.02■■■□□ 2.4
Ube4aE9Q735 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
Ube4aE9Q735 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
Ube4aE9Q735 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
Ube4aE9Q735 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC30.01■■■□□ 2.39
Ube4aE9Q735 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC30■■■□□ 2.39
Ube4aE9Q735 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC29.99■■■□□ 2.39
Ube4aE9Q735 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC29.97■■■□□ 2.39
Ube4aE9Q735 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC29.96■■■□□ 2.39
Ube4aE9Q735 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC29.96■■■□□ 2.39
Ube4aE9Q735 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC29.95■■■□□ 2.39
Ube4aE9Q735 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC29.95■■■□□ 2.39
Ube4aE9Q735 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC29.94■■■□□ 2.38
Ube4aE9Q735 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
Ube4aE9Q735 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC29.93■■■□□ 2.38
Ube4aE9Q735 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC29.93■■■□□ 2.38
Ube4aE9Q735 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC29.92■■■□□ 2.38
Ube4aE9Q735 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC29.91■■■□□ 2.38
Ube4aE9Q735 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC29.91■■■□□ 2.38
Ube4aE9Q735 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
Ube4aE9Q735 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC29.89■■■□□ 2.38
Ube4aE9Q735 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC29.89■■■□□ 2.38
Ube4aE9Q735 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC29.88■■■□□ 2.37
Ube4aE9Q735 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC29.86■■■□□ 2.37
Ube4aE9Q735 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC29.86■■■□□ 2.37
Ube4aE9Q735 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC29.86■■■□□ 2.37
Ube4aE9Q735 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC29.86■■■□□ 2.37
Ube4aE9Q735 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC29.86■■■□□ 2.37
Ube4aE9Q735 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC29.85■■■□□ 2.37
Ube4aE9Q735 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC29.84■■■□□ 2.37
Ube4aE9Q735 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC29.84■■■□□ 2.37
Ube4aE9Q735 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC29.83■■■□□ 2.37
Ube4aE9Q735 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.37
Ube4aE9Q735 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC29.82■■■□□ 2.36
Ube4aE9Q735 Gm11599-201ENSMUST00000118720 878 ntBASIC29.81■■■□□ 2.36
Ube4aE9Q735 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC29.81■■■□□ 2.36
Ube4aE9Q735 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC29.81■■■□□ 2.36
Ube4aE9Q735 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
Ube4aE9Q735 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC29.8■■■□□ 2.36
Ube4aE9Q735 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC29.78■■■□□ 2.36
Ube4aE9Q735 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC29.78■■■□□ 2.36
Ube4aE9Q735 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC29.76■■■□□ 2.35
Ube4aE9Q735 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC29.76■■■□□ 2.35
Ube4aE9Q735 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC29.75■■■□□ 2.35
Ube4aE9Q735 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC29.75■■■□□ 2.35
Ube4aE9Q735 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
Ube4aE9Q735 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
Ube4aE9Q735 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
Ube4aE9Q735 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC29.74■■■□□ 2.35
Ube4aE9Q735 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC29.74■■■□□ 2.35
Ube4aE9Q735 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
Ube4aE9Q735 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC29.73■■■□□ 2.35
Ube4aE9Q735 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC29.73■■■□□ 2.35
Ube4aE9Q735 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC29.73■■■□□ 2.35
Ube4aE9Q735 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC29.73■■■□□ 2.35
Ube4aE9Q735 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
Ube4aE9Q735 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC29.72■■■□□ 2.35
Ube4aE9Q735 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC29.72■■■□□ 2.35
Ube4aE9Q735 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC29.72■■■□□ 2.35
Ube4aE9Q735 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC29.72■■■□□ 2.35
Ube4aE9Q735 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
Ube4aE9Q735 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC29.7■■■□□ 2.35
Ube4aE9Q735 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC29.7■■■□□ 2.35
Ube4aE9Q735 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC29.69■■■□□ 2.34
Ube4aE9Q735 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC29.69■■■□□ 2.34
Ube4aE9Q735 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC29.69■■■□□ 2.34
Ube4aE9Q735 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC29.69■■■□□ 2.34
Ube4aE9Q735 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC29.68■■■□□ 2.34
Ube4aE9Q735 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC29.67■■■□□ 2.34
Ube4aE9Q735 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
Ube4aE9Q735 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
Ube4aE9Q735 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC29.66■■■□□ 2.34
Ube4aE9Q735 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
Ube4aE9Q735 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC29.66■■■□□ 2.34
Ube4aE9Q735 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC29.65■■■□□ 2.34
Ube4aE9Q735 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC29.63■■■□□ 2.33
Ube4aE9Q735 Gm30023-201ENSMUST00000197970 889 ntBASIC29.63■■■□□ 2.33
Ube4aE9Q735 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC29.62■■■□□ 2.33
Ube4aE9Q735 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC29.62■■■□□ 2.33
Ube4aE9Q735 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
Ube4aE9Q735 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC29.61■■■□□ 2.33
Ube4aE9Q735 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC29.61■■■□□ 2.33
Ube4aE9Q735 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
Ube4aE9Q735 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC29.6■■■□□ 2.33
Ube4aE9Q735 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC29.6■■■□□ 2.33
Ube4aE9Q735 Pcf11-205ENSMUST00000208255 1720 ntBASIC29.58■■■□□ 2.33
Ube4aE9Q735 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC29.57■■■□□ 2.32
Ube4aE9Q735 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
Ube4aE9Q735 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC29.56■■■□□ 2.32
Ube4aE9Q735 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
Ube4aE9Q735 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
Ube4aE9Q735 AC131739.1-201ENSMUST00000221692 1245 ntBASIC29.54■■■□□ 2.32
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms