Protein–RNA interactions for Protein: B9EKX1

Ptchd4, Patched domain-containing protein 4, mousemouse

Predictions only

Length 904 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd4B9EKX1 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
Ptchd4B9EKX1 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
Ptchd4B9EKX1 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
Ptchd4B9EKX1 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
Ptchd4B9EKX1 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
Ptchd4B9EKX1 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
Ptchd4B9EKX1 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
Ptchd4B9EKX1 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
Ptchd4B9EKX1 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
Ptchd4B9EKX1 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC26.67■■□□□ 1.86
Ptchd4B9EKX1 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC26.67■■□□□ 1.86
Ptchd4B9EKX1 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Ptchd4B9EKX1 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC26.66■■□□□ 1.86
Ptchd4B9EKX1 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC26.66■■□□□ 1.86
Ptchd4B9EKX1 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Ptchd4B9EKX1 Gm7432-201ENSMUST00000210343 879 ntBASIC26.64■■□□□ 1.86
Ptchd4B9EKX1 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC26.64■■□□□ 1.85
Ptchd4B9EKX1 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC26.64■■□□□ 1.85
Ptchd4B9EKX1 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC26.62■■□□□ 1.85
Ptchd4B9EKX1 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC26.62■■□□□ 1.85
Ptchd4B9EKX1 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Ptchd4B9EKX1 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC26.61■■□□□ 1.85
Ptchd4B9EKX1 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
Ptchd4B9EKX1 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC26.59■■□□□ 1.85
Ptchd4B9EKX1 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
Ptchd4B9EKX1 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC26.58■■□□□ 1.84
Ptchd4B9EKX1 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
Ptchd4B9EKX1 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC26.57■■□□□ 1.84
Ptchd4B9EKX1 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC26.57■■□□□ 1.84
Ptchd4B9EKX1 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Ptchd4B9EKX1 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
Ptchd4B9EKX1 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC26.54■■□□□ 1.84
Ptchd4B9EKX1 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC26.54■■□□□ 1.84
Ptchd4B9EKX1 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
Ptchd4B9EKX1 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
Ptchd4B9EKX1 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC26.53■■□□□ 1.84
Ptchd4B9EKX1 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Ptchd4B9EKX1 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC26.51■■□□□ 1.83
Ptchd4B9EKX1 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC26.5■■□□□ 1.83
Ptchd4B9EKX1 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC26.5■■□□□ 1.83
Ptchd4B9EKX1 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC26.5■■□□□ 1.83
Ptchd4B9EKX1 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
Ptchd4B9EKX1 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC26.48■■□□□ 1.83
Ptchd4B9EKX1 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Ptchd4B9EKX1 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
Ptchd4B9EKX1 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Ptchd4B9EKX1 Gm11599-201ENSMUST00000118720 878 ntBASIC26.47■■□□□ 1.83
Ptchd4B9EKX1 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC26.47■■□□□ 1.83
Ptchd4B9EKX1 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC26.47■■□□□ 1.83
Ptchd4B9EKX1 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
Ptchd4B9EKX1 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC26.46■■□□□ 1.83
Ptchd4B9EKX1 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC26.44■■□□□ 1.82
Ptchd4B9EKX1 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC26.44■■□□□ 1.82
Ptchd4B9EKX1 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
Ptchd4B9EKX1 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC26.43■■□□□ 1.82
Ptchd4B9EKX1 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
Ptchd4B9EKX1 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC26.42■■□□□ 1.82
Ptchd4B9EKX1 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC26.42■■□□□ 1.82
Ptchd4B9EKX1 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC26.42■■□□□ 1.82
Ptchd4B9EKX1 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Ptchd4B9EKX1 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC26.41■■□□□ 1.82
Ptchd4B9EKX1 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC26.41■■□□□ 1.82
Ptchd4B9EKX1 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Ptchd4B9EKX1 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC26.41■■□□□ 1.82
Ptchd4B9EKX1 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC26.41■■□□□ 1.82
Ptchd4B9EKX1 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Ptchd4B9EKX1 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Ptchd4B9EKX1 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC26.4■■□□□ 1.82
Ptchd4B9EKX1 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC26.4■■□□□ 1.82
Ptchd4B9EKX1 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC26.39■■□□□ 1.82
Ptchd4B9EKX1 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC26.39■■□□□ 1.82
Ptchd4B9EKX1 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
Ptchd4B9EKX1 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC26.39■■□□□ 1.82
Ptchd4B9EKX1 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC26.39■■□□□ 1.81
Ptchd4B9EKX1 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Ptchd4B9EKX1 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC26.38■■□□□ 1.81
Ptchd4B9EKX1 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Ptchd4B9EKX1 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Ptchd4B9EKX1 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Ptchd4B9EKX1 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC26.35■■□□□ 1.81
Ptchd4B9EKX1 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Ptchd4B9EKX1 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
Ptchd4B9EKX1 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
Ptchd4B9EKX1 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC26.33■■□□□ 1.81
Ptchd4B9EKX1 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
Ptchd4B9EKX1 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC26.33■■□□□ 1.81
Ptchd4B9EKX1 Gm30023-201ENSMUST00000197970 889 ntBASIC26.32■■□□□ 1.8
Ptchd4B9EKX1 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC26.32■■□□□ 1.8
Ptchd4B9EKX1 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC26.31■■□□□ 1.8
Ptchd4B9EKX1 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC26.31■■□□□ 1.8
Ptchd4B9EKX1 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
Ptchd4B9EKX1 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Ptchd4B9EKX1 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
Ptchd4B9EKX1 Pcf11-205ENSMUST00000208255 1720 ntBASIC26.28■■□□□ 1.8
Ptchd4B9EKX1 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
Ptchd4B9EKX1 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Ptchd4B9EKX1 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Ptchd4B9EKX1 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Ptchd4B9EKX1 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
Ptchd4B9EKX1 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
Retrieved 100 of 76,532 protein–RNA pairs in 81.7 ms