Protein–RNA interactions for Protein: A3KGB4

Tbc1d8b, TBC1 domain family member 8B, mousemouse

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tbc1d8bA3KGB4 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
Tbc1d8bA3KGB4 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC28.85■■■□□ 2.21
Tbc1d8bA3KGB4 Gm7432-201ENSMUST00000210343 879 ntBASIC28.85■■■□□ 2.21
Tbc1d8bA3KGB4 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC28.84■■■□□ 2.21
Tbc1d8bA3KGB4 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
Tbc1d8bA3KGB4 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
Tbc1d8bA3KGB4 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC28.82■■■□□ 2.2
Tbc1d8bA3KGB4 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
Tbc1d8bA3KGB4 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
Tbc1d8bA3KGB4 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC28.81■■■□□ 2.2
Tbc1d8bA3KGB4 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
Tbc1d8bA3KGB4 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC28.78■■■□□ 2.2
Tbc1d8bA3KGB4 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC28.78■■■□□ 2.2
Tbc1d8bA3KGB4 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC28.77■■■□□ 2.2
Tbc1d8bA3KGB4 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC28.77■■■□□ 2.2
Tbc1d8bA3KGB4 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC28.76■■■□□ 2.19
Tbc1d8bA3KGB4 Gm9905-201ENSMUST00000065740 1845 ntBASIC28.76■■■□□ 2.19
Tbc1d8bA3KGB4 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC28.75■■■□□ 2.19
Tbc1d8bA3KGB4 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC28.75■■■□□ 2.19
Tbc1d8bA3KGB4 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC28.75■■■□□ 2.19
Tbc1d8bA3KGB4 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC28.75■■■□□ 2.19
Tbc1d8bA3KGB4 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC28.75■■■□□ 2.19
Tbc1d8bA3KGB4 Gm43445-201ENSMUST00000198564 2091 ntBASIC28.74■■■□□ 2.19
Tbc1d8bA3KGB4 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC28.74■■■□□ 2.19
Tbc1d8bA3KGB4 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
Tbc1d8bA3KGB4 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC28.73■■■□□ 2.19
Tbc1d8bA3KGB4 Gm6206-201ENSMUST00000133472 2199 ntBASIC28.73■■■□□ 2.19
Tbc1d8bA3KGB4 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC28.73■■■□□ 2.19
Tbc1d8bA3KGB4 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
Tbc1d8bA3KGB4 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
Tbc1d8bA3KGB4 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
Tbc1d8bA3KGB4 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC28.71■■■□□ 2.19
Tbc1d8bA3KGB4 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC28.71■■■□□ 2.19
Tbc1d8bA3KGB4 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC28.7■■■□□ 2.18
Tbc1d8bA3KGB4 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC28.7■■■□□ 2.18
Tbc1d8bA3KGB4 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.18
Tbc1d8bA3KGB4 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC28.69■■■□□ 2.18
Tbc1d8bA3KGB4 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
Tbc1d8bA3KGB4 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
Tbc1d8bA3KGB4 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC28.68■■■□□ 2.18
Tbc1d8bA3KGB4 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC28.68■■■□□ 2.18
Tbc1d8bA3KGB4 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
Tbc1d8bA3KGB4 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
Tbc1d8bA3KGB4 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC28.64■■■□□ 2.18
Tbc1d8bA3KGB4 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC28.64■■■□□ 2.18
Tbc1d8bA3KGB4 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.17
Tbc1d8bA3KGB4 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC28.63■■■□□ 2.17
Tbc1d8bA3KGB4 Gm11599-201ENSMUST00000118720 878 ntBASIC28.63■■■□□ 2.17
Tbc1d8bA3KGB4 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC28.62■■■□□ 2.17
Tbc1d8bA3KGB4 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC28.62■■■□□ 2.17
Tbc1d8bA3KGB4 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
Tbc1d8bA3KGB4 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
Tbc1d8bA3KGB4 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC28.61■■■□□ 2.17
Tbc1d8bA3KGB4 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
Tbc1d8bA3KGB4 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
Tbc1d8bA3KGB4 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC28.59■■■□□ 2.17
Tbc1d8bA3KGB4 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
Tbc1d8bA3KGB4 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
Tbc1d8bA3KGB4 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
Tbc1d8bA3KGB4 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC28.58■■■□□ 2.17
Tbc1d8bA3KGB4 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
Tbc1d8bA3KGB4 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
Tbc1d8bA3KGB4 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
Tbc1d8bA3KGB4 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC28.56■■■□□ 2.16
Tbc1d8bA3KGB4 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
Tbc1d8bA3KGB4 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
Tbc1d8bA3KGB4 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC28.54■■■□□ 2.16
Tbc1d8bA3KGB4 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC28.53■■■□□ 2.16
Tbc1d8bA3KGB4 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
Tbc1d8bA3KGB4 Gm11175-201ENSMUST00000116172 543 ntBASIC28.52■■■□□ 2.16
Tbc1d8bA3KGB4 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC28.52■■■□□ 2.16
Tbc1d8bA3KGB4 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC28.52■■■□□ 2.16
Tbc1d8bA3KGB4 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC28.52■■■□□ 2.16
Tbc1d8bA3KGB4 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC28.51■■■□□ 2.15
Tbc1d8bA3KGB4 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC28.5■■■□□ 2.15
Tbc1d8bA3KGB4 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC28.48■■■□□ 2.15
Tbc1d8bA3KGB4 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
Tbc1d8bA3KGB4 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
Tbc1d8bA3KGB4 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC28.47■■■□□ 2.15
Tbc1d8bA3KGB4 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC28.47■■■□□ 2.15
Tbc1d8bA3KGB4 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
Tbc1d8bA3KGB4 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
Tbc1d8bA3KGB4 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC28.46■■■□□ 2.15
Tbc1d8bA3KGB4 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC28.45■■■□□ 2.15
Tbc1d8bA3KGB4 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
Tbc1d8bA3KGB4 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
Tbc1d8bA3KGB4 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
Tbc1d8bA3KGB4 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC28.43■■■□□ 2.14
Tbc1d8bA3KGB4 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
Tbc1d8bA3KGB4 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC28.43■■■□□ 2.14
Tbc1d8bA3KGB4 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
Tbc1d8bA3KGB4 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC28.41■■■□□ 2.14
Tbc1d8bA3KGB4 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
Tbc1d8bA3KGB4 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
Tbc1d8bA3KGB4 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC28.4■■■□□ 2.14
Tbc1d8bA3KGB4 Mir6538-201ENSMUST00000183713 110 ntBASIC28.4■■■□□ 2.14
Tbc1d8bA3KGB4 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.13
Tbc1d8bA3KGB4 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
Tbc1d8bA3KGB4 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
Tbc1d8bA3KGB4 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC28.37■■■□□ 2.13
Retrieved 100 of 76,532 protein–RNA pairs in 15.3 ms