Protein–RNA interactions for Protein: A0A1B0GSS6

Gm3854, Predicted gene 3854, mousemouse

Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3854A0A1B0GSS6 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC24.78■■□□□ 1.56
Gm3854A0A1B0GSS6 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Gm3854A0A1B0GSS6 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Gm3854A0A1B0GSS6 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC24.76■■□□□ 1.55
Gm3854A0A1B0GSS6 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC24.76■■□□□ 1.55
Gm3854A0A1B0GSS6 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC24.75■■□□□ 1.55
Gm3854A0A1B0GSS6 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
Gm3854A0A1B0GSS6 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC24.75■■□□□ 1.55
Gm3854A0A1B0GSS6 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC24.75■■□□□ 1.55
Gm3854A0A1B0GSS6 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
Gm3854A0A1B0GSS6 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Gm3854A0A1B0GSS6 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC24.73■■□□□ 1.55
Gm3854A0A1B0GSS6 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC24.72■■□□□ 1.55
Gm3854A0A1B0GSS6 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC24.72■■□□□ 1.55
Gm3854A0A1B0GSS6 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
Gm3854A0A1B0GSS6 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Gm3854A0A1B0GSS6 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC24.7■■□□□ 1.54
Gm3854A0A1B0GSS6 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
Gm3854A0A1B0GSS6 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC24.69■■□□□ 1.54
Gm3854A0A1B0GSS6 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC24.68■■□□□ 1.54
Gm3854A0A1B0GSS6 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Gm3854A0A1B0GSS6 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Gm3854A0A1B0GSS6 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Gm3854A0A1B0GSS6 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
Gm3854A0A1B0GSS6 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Gm3854A0A1B0GSS6 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC24.65■■□□□ 1.54
Gm3854A0A1B0GSS6 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC24.65■■□□□ 1.54
Gm3854A0A1B0GSS6 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Gm3854A0A1B0GSS6 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Gm3854A0A1B0GSS6 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
Gm3854A0A1B0GSS6 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC24.63■■□□□ 1.53
Gm3854A0A1B0GSS6 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
Gm3854A0A1B0GSS6 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC24.62■■□□□ 1.53
Gm3854A0A1B0GSS6 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Gm3854A0A1B0GSS6 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Gm3854A0A1B0GSS6 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC24.61■■□□□ 1.53
Gm3854A0A1B0GSS6 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
Gm3854A0A1B0GSS6 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC24.61■■□□□ 1.53
Gm3854A0A1B0GSS6 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
Gm3854A0A1B0GSS6 Gm6345-201ENSMUST00000180378 1691 ntBASIC24.6■■□□□ 1.53
Gm3854A0A1B0GSS6 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC24.6■■□□□ 1.53
Gm3854A0A1B0GSS6 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
Gm3854A0A1B0GSS6 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
Gm3854A0A1B0GSS6 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Gm3854A0A1B0GSS6 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC24.59■■□□□ 1.53
Gm3854A0A1B0GSS6 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC24.59■■□□□ 1.53
Gm3854A0A1B0GSS6 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Gm3854A0A1B0GSS6 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
Gm3854A0A1B0GSS6 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC24.56■■□□□ 1.52
Gm3854A0A1B0GSS6 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC24.56■■□□□ 1.52
Gm3854A0A1B0GSS6 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC24.56■■□□□ 1.52
Gm3854A0A1B0GSS6 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
Gm3854A0A1B0GSS6 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Gm3854A0A1B0GSS6 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC24.54■■□□□ 1.52
Gm3854A0A1B0GSS6 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC24.54■■□□□ 1.52
Gm3854A0A1B0GSS6 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC24.54■■□□□ 1.52
Gm3854A0A1B0GSS6 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
Gm3854A0A1B0GSS6 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC24.54■■□□□ 1.52
Gm3854A0A1B0GSS6 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
Gm3854A0A1B0GSS6 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC24.52■■□□□ 1.52
Gm3854A0A1B0GSS6 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC24.5■■□□□ 1.51
Gm3854A0A1B0GSS6 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
Gm3854A0A1B0GSS6 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC24.49■■□□□ 1.51
Gm3854A0A1B0GSS6 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC24.49■■□□□ 1.51
Gm3854A0A1B0GSS6 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC24.49■■□□□ 1.51
Gm3854A0A1B0GSS6 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
Gm3854A0A1B0GSS6 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Gm3854A0A1B0GSS6 AC131739.1-201ENSMUST00000221692 1245 ntBASIC24.47■■□□□ 1.51
Gm3854A0A1B0GSS6 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
Gm3854A0A1B0GSS6 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC24.47■■□□□ 1.51
Gm3854A0A1B0GSS6 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC24.46■■□□□ 1.51
Gm3854A0A1B0GSS6 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Gm3854A0A1B0GSS6 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC24.44■■□□□ 1.5
Gm3854A0A1B0GSS6 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Gm3854A0A1B0GSS6 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Gm3854A0A1B0GSS6 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Gm3854A0A1B0GSS6 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Gm3854A0A1B0GSS6 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC24.42■■□□□ 1.5
Gm3854A0A1B0GSS6 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Gm3854A0A1B0GSS6 Gm11175-201ENSMUST00000116172 543 ntBASIC24.41■■□□□ 1.5
Gm3854A0A1B0GSS6 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC24.41■■□□□ 1.5
Gm3854A0A1B0GSS6 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
Gm3854A0A1B0GSS6 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC24.41■■□□□ 1.5
Gm3854A0A1B0GSS6 Gm30023-201ENSMUST00000197970 889 ntBASIC24.4■■□□□ 1.5
Gm3854A0A1B0GSS6 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Gm3854A0A1B0GSS6 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Gm3854A0A1B0GSS6 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC24.39■■□□□ 1.49
Gm3854A0A1B0GSS6 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
Gm3854A0A1B0GSS6 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC24.38■■□□□ 1.49
Gm3854A0A1B0GSS6 Mir6538-201ENSMUST00000183713 110 ntBASIC24.38■■□□□ 1.49
Gm3854A0A1B0GSS6 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
Gm3854A0A1B0GSS6 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
Gm3854A0A1B0GSS6 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
Gm3854A0A1B0GSS6 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC24.37■■□□□ 1.49
Gm3854A0A1B0GSS6 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Gm3854A0A1B0GSS6 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Gm3854A0A1B0GSS6 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
Gm3854A0A1B0GSS6 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC24.36■■□□□ 1.49
Gm3854A0A1B0GSS6 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Gm3854A0A1B0GSS6 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC24.35■■□□□ 1.49
Retrieved 100 of 76,532 protein–RNA pairs in 139.1 ms