Protein–RNA interactions for Protein: A0A140T8K2

Rpl13a-ps1, Ribosomal protein 13A, pseudogene 1, mousemouse

Known RBP Predictions only

Length 203 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl13a-ps1A0A140T8K2 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rpl13a-ps1A0A140T8K2 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC20.21■□□□□ 0.83
Rpl13a-ps1A0A140T8K2 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC20.21■□□□□ 0.83
Rpl13a-ps1A0A140T8K2 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC20.21■□□□□ 0.83
Rpl13a-ps1A0A140T8K2 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rpl13a-ps1A0A140T8K2 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Rpl13a-ps1A0A140T8K2 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Rpl13a-ps1A0A140T8K2 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Rpl13a-ps1A0A140T8K2 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Rpl13a-ps1A0A140T8K2 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rpl13a-ps1A0A140T8K2 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rpl13a-ps1A0A140T8K2 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Rpl13a-ps1A0A140T8K2 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rpl13a-ps1A0A140T8K2 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rpl13a-ps1A0A140T8K2 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rpl13a-ps1A0A140T8K2 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rpl13a-ps1A0A140T8K2 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Rpl13a-ps1A0A140T8K2 Gm11599-201ENSMUST00000118720 878 ntBASIC20.17■□□□□ 0.82
Rpl13a-ps1A0A140T8K2 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rpl13a-ps1A0A140T8K2 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rpl13a-ps1A0A140T8K2 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Rpl13a-ps1A0A140T8K2 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Rpl13a-ps1A0A140T8K2 Zxda-201ENSMUST00000117281 2621 ntBASIC20.15■□□□□ 0.82
Rpl13a-ps1A0A140T8K2 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Rpl13a-ps1A0A140T8K2 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rpl13a-ps1A0A140T8K2 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Rpl13a-ps1A0A140T8K2 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rpl13a-ps1A0A140T8K2 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC20.14■□□□□ 0.81
Rpl13a-ps1A0A140T8K2 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC20.14■□□□□ 0.81
Rpl13a-ps1A0A140T8K2 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Rpl13a-ps1A0A140T8K2 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rpl13a-ps1A0A140T8K2 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC20.12■□□□□ 0.81
Rpl13a-ps1A0A140T8K2 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Rpl13a-ps1A0A140T8K2 Gm2415-204ENSMUST00000190235 2004 ntBASIC20.12■□□□□ 0.81
Rpl13a-ps1A0A140T8K2 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rpl13a-ps1A0A140T8K2 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rpl13a-ps1A0A140T8K2 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rpl13a-ps1A0A140T8K2 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
Rpl13a-ps1A0A140T8K2 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Rpl13a-ps1A0A140T8K2 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rpl13a-ps1A0A140T8K2 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC20.07■□□□□ 0.8
Rpl13a-ps1A0A140T8K2 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rpl13a-ps1A0A140T8K2 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rpl13a-ps1A0A140T8K2 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Rpl13a-ps1A0A140T8K2 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rpl13a-ps1A0A140T8K2 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Rpl13a-ps1A0A140T8K2 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC20.04■□□□□ 0.8
Rpl13a-ps1A0A140T8K2 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rpl13a-ps1A0A140T8K2 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rpl13a-ps1A0A140T8K2 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC20.03■□□□□ 0.8
Rpl13a-ps1A0A140T8K2 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Rpl13a-ps1A0A140T8K2 Gm6658-202ENSMUST00000209493 1885 ntBASIC20.03■□□□□ 0.8
Rpl13a-ps1A0A140T8K2 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Rpl13a-ps1A0A140T8K2 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Rpl13a-ps1A0A140T8K2 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rpl13a-ps1A0A140T8K2 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC20■□□□□ 0.79
Rpl13a-ps1A0A140T8K2 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC20■□□□□ 0.79
Rpl13a-ps1A0A140T8K2 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC20■□□□□ 0.79
Rpl13a-ps1A0A140T8K2 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rpl13a-ps1A0A140T8K2 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rpl13a-ps1A0A140T8K2 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC19.99■□□□□ 0.79
Rpl13a-ps1A0A140T8K2 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rpl13a-ps1A0A140T8K2 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rpl13a-ps1A0A140T8K2 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rpl13a-ps1A0A140T8K2 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rpl13a-ps1A0A140T8K2 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC19.98■□□□□ 0.79
Rpl13a-ps1A0A140T8K2 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rpl13a-ps1A0A140T8K2 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC19.97■□□□□ 0.79
Rpl13a-ps1A0A140T8K2 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC19.97■□□□□ 0.79
Rpl13a-ps1A0A140T8K2 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Rpl13a-ps1A0A140T8K2 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Rpl13a-ps1A0A140T8K2 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rpl13a-ps1A0A140T8K2 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC19.95■□□□□ 0.78
Rpl13a-ps1A0A140T8K2 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Rpl13a-ps1A0A140T8K2 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC19.95■□□□□ 0.78
Rpl13a-ps1A0A140T8K2 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Rpl13a-ps1A0A140T8K2 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Rpl13a-ps1A0A140T8K2 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC19.94■□□□□ 0.78
Rpl13a-ps1A0A140T8K2 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rpl13a-ps1A0A140T8K2 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC19.93■□□□□ 0.78
Rpl13a-ps1A0A140T8K2 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Rpl13a-ps1A0A140T8K2 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC19.92■□□□□ 0.78
Rpl13a-ps1A0A140T8K2 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rpl13a-ps1A0A140T8K2 Mir6538-201ENSMUST00000183713 110 ntBASIC19.92■□□□□ 0.78
Rpl13a-ps1A0A140T8K2 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Rpl13a-ps1A0A140T8K2 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC19.91■□□□□ 0.78
Rpl13a-ps1A0A140T8K2 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Rpl13a-ps1A0A140T8K2 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rpl13a-ps1A0A140T8K2 AC131739.1-201ENSMUST00000221692 1245 ntBASIC19.9■□□□□ 0.78
Rpl13a-ps1A0A140T8K2 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rpl13a-ps1A0A140T8K2 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Rpl13a-ps1A0A140T8K2 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Rpl13a-ps1A0A140T8K2 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rpl13a-ps1A0A140T8K2 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC19.89■□□□□ 0.77
Rpl13a-ps1A0A140T8K2 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rpl13a-ps1A0A140T8K2 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC19.88■□□□□ 0.77
Rpl13a-ps1A0A140T8K2 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
Rpl13a-ps1A0A140T8K2 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rpl13a-ps1A0A140T8K2 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rpl13a-ps1A0A140T8K2 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 65 ms