Protein–RNA interactions for Protein: A0A0B4J1J2

Igkv5-43, Immunoglobulin kappa chain variable 5-43 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv5-43A0A0B4J1J2 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC25.45■■□□□ 1.66
Igkv5-43A0A0B4J1J2 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC25.45■■□□□ 1.66
Igkv5-43A0A0B4J1J2 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Igkv5-43A0A0B4J1J2 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Igkv5-43A0A0B4J1J2 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Igkv5-43A0A0B4J1J2 Gm8503-201ENSMUST00000118131 455 ntBASIC25.41■■□□□ 1.66
Igkv5-43A0A0B4J1J2 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC25.41■■□□□ 1.66
Igkv5-43A0A0B4J1J2 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
Igkv5-43A0A0B4J1J2 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC25.39■■□□□ 1.66
Igkv5-43A0A0B4J1J2 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC25.39■■□□□ 1.65
Igkv5-43A0A0B4J1J2 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Igkv5-43A0A0B4J1J2 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Igkv5-43A0A0B4J1J2 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC25.37■■□□□ 1.65
Igkv5-43A0A0B4J1J2 Gm6821-201ENSMUST00000107540 542 ntBASIC25.37■■□□□ 1.65
Igkv5-43A0A0B4J1J2 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Igkv5-43A0A0B4J1J2 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Igkv5-43A0A0B4J1J2 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Igkv5-43A0A0B4J1J2 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
Igkv5-43A0A0B4J1J2 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
Igkv5-43A0A0B4J1J2 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC25.36■■□□□ 1.65
Igkv5-43A0A0B4J1J2 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
Igkv5-43A0A0B4J1J2 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
Igkv5-43A0A0B4J1J2 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC25.35■■□□□ 1.65
Igkv5-43A0A0B4J1J2 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC25.35■■□□□ 1.65
Igkv5-43A0A0B4J1J2 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
Igkv5-43A0A0B4J1J2 Nkain2-201ENSMUST00000092602 558 ntBASIC25.34■■□□□ 1.65
Igkv5-43A0A0B4J1J2 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Igkv5-43A0A0B4J1J2 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC25.33■■□□□ 1.65
Igkv5-43A0A0B4J1J2 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC25.33■■□□□ 1.64
Igkv5-43A0A0B4J1J2 Gm43445-201ENSMUST00000198564 2091 ntBASIC25.32■■□□□ 1.64
Igkv5-43A0A0B4J1J2 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC25.31■■□□□ 1.64
Igkv5-43A0A0B4J1J2 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Igkv5-43A0A0B4J1J2 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
Igkv5-43A0A0B4J1J2 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC25.29■■□□□ 1.64
Igkv5-43A0A0B4J1J2 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Igkv5-43A0A0B4J1J2 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC25.29■■□□□ 1.64
Igkv5-43A0A0B4J1J2 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Igkv5-43A0A0B4J1J2 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC25.28■■□□□ 1.64
Igkv5-43A0A0B4J1J2 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC25.28■■□□□ 1.64
Igkv5-43A0A0B4J1J2 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC25.28■■□□□ 1.64
Igkv5-43A0A0B4J1J2 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Igkv5-43A0A0B4J1J2 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Igkv5-43A0A0B4J1J2 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
Igkv5-43A0A0B4J1J2 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC25.27■■□□□ 1.64
Igkv5-43A0A0B4J1J2 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
Igkv5-43A0A0B4J1J2 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
Igkv5-43A0A0B4J1J2 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC25.26■■□□□ 1.63
Igkv5-43A0A0B4J1J2 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC25.26■■□□□ 1.63
Igkv5-43A0A0B4J1J2 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC25.26■■□□□ 1.63
Igkv5-43A0A0B4J1J2 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Igkv5-43A0A0B4J1J2 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC25.24■■□□□ 1.63
Igkv5-43A0A0B4J1J2 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC25.24■■□□□ 1.63
Igkv5-43A0A0B4J1J2 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Igkv5-43A0A0B4J1J2 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC25.23■■□□□ 1.63
Igkv5-43A0A0B4J1J2 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC25.23■■□□□ 1.63
Igkv5-43A0A0B4J1J2 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC25.23■■□□□ 1.63
Igkv5-43A0A0B4J1J2 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
Igkv5-43A0A0B4J1J2 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Igkv5-43A0A0B4J1J2 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Igkv5-43A0A0B4J1J2 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
Igkv5-43A0A0B4J1J2 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC25.21■■□□□ 1.63
Igkv5-43A0A0B4J1J2 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
Igkv5-43A0A0B4J1J2 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC25.21■■□□□ 1.63
Igkv5-43A0A0B4J1J2 Gm6206-201ENSMUST00000133472 2199 ntBASIC25.21■■□□□ 1.63
Igkv5-43A0A0B4J1J2 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
Igkv5-43A0A0B4J1J2 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC25.2■■□□□ 1.62
Igkv5-43A0A0B4J1J2 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
Igkv5-43A0A0B4J1J2 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Igkv5-43A0A0B4J1J2 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Igkv5-43A0A0B4J1J2 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
Igkv5-43A0A0B4J1J2 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC25.17■■□□□ 1.62
Igkv5-43A0A0B4J1J2 Gm9905-201ENSMUST00000065740 1845 ntBASIC25.16■■□□□ 1.62
Igkv5-43A0A0B4J1J2 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Igkv5-43A0A0B4J1J2 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC25.15■■□□□ 1.62
Igkv5-43A0A0B4J1J2 Pcf11-205ENSMUST00000208255 1720 ntBASIC25.15■■□□□ 1.62
Igkv5-43A0A0B4J1J2 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
Igkv5-43A0A0B4J1J2 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Igkv5-43A0A0B4J1J2 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
Igkv5-43A0A0B4J1J2 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC25.13■■□□□ 1.61
Igkv5-43A0A0B4J1J2 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC25.12■■□□□ 1.61
Igkv5-43A0A0B4J1J2 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
Igkv5-43A0A0B4J1J2 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC25.1■■□□□ 1.61
Igkv5-43A0A0B4J1J2 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
Igkv5-43A0A0B4J1J2 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
Igkv5-43A0A0B4J1J2 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC25.09■■□□□ 1.61
Igkv5-43A0A0B4J1J2 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC25.09■■□□□ 1.61
Igkv5-43A0A0B4J1J2 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
Igkv5-43A0A0B4J1J2 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
Igkv5-43A0A0B4J1J2 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC25.07■■□□□ 1.6
Igkv5-43A0A0B4J1J2 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC25.07■■□□□ 1.6
Igkv5-43A0A0B4J1J2 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
Igkv5-43A0A0B4J1J2 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Igkv5-43A0A0B4J1J2 Gm30023-201ENSMUST00000197970 889 ntBASIC25.07■■□□□ 1.6
Igkv5-43A0A0B4J1J2 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC25.06■■□□□ 1.6
Igkv5-43A0A0B4J1J2 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Igkv5-43A0A0B4J1J2 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC25.05■■□□□ 1.6
Igkv5-43A0A0B4J1J2 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Igkv5-43A0A0B4J1J2 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
Igkv5-43A0A0B4J1J2 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
Igkv5-43A0A0B4J1J2 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC25.03■■□□□ 1.6
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms