Protein–RNA interactions for Protein: A0A075B6A6

Trav6n-7, T cell receptor alpha variable 6N-7 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-7A0A075B6A6 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Trav6n-7A0A075B6A6 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trav6n-7A0A075B6A6 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trav6n-7A0A075B6A6 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trav6n-7A0A075B6A6 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trav6n-7A0A075B6A6 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trav6n-7A0A075B6A6 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC20.71■□□□□ 0.91
Trav6n-7A0A075B6A6 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trav6n-7A0A075B6A6 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trav6n-7A0A075B6A6 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC20.7■□□□□ 0.9
Trav6n-7A0A075B6A6 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trav6n-7A0A075B6A6 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Trav6n-7A0A075B6A6 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC20.69■□□□□ 0.9
Trav6n-7A0A075B6A6 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Trav6n-7A0A075B6A6 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trav6n-7A0A075B6A6 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trav6n-7A0A075B6A6 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trav6n-7A0A075B6A6 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Trav6n-7A0A075B6A6 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trav6n-7A0A075B6A6 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trav6n-7A0A075B6A6 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trav6n-7A0A075B6A6 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trav6n-7A0A075B6A6 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trav6n-7A0A075B6A6 Amer2-203ENSMUST00000225247 2662 ntBASIC20.63■□□□□ 0.89
Trav6n-7A0A075B6A6 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trav6n-7A0A075B6A6 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC20.63■□□□□ 0.89
Trav6n-7A0A075B6A6 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Trav6n-7A0A075B6A6 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC20.63■□□□□ 0.89
Trav6n-7A0A075B6A6 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trav6n-7A0A075B6A6 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trav6n-7A0A075B6A6 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trav6n-7A0A075B6A6 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Trav6n-7A0A075B6A6 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trav6n-7A0A075B6A6 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trav6n-7A0A075B6A6 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trav6n-7A0A075B6A6 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trav6n-7A0A075B6A6 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC20.61■□□□□ 0.89
Trav6n-7A0A075B6A6 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trav6n-7A0A075B6A6 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC20.61■□□□□ 0.89
Trav6n-7A0A075B6A6 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Trav6n-7A0A075B6A6 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trav6n-7A0A075B6A6 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trav6n-7A0A075B6A6 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trav6n-7A0A075B6A6 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Trav6n-7A0A075B6A6 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC20.58■□□□□ 0.89
Trav6n-7A0A075B6A6 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trav6n-7A0A075B6A6 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Trav6n-7A0A075B6A6 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trav6n-7A0A075B6A6 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Trav6n-7A0A075B6A6 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Trav6n-7A0A075B6A6 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trav6n-7A0A075B6A6 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC20.55■□□□□ 0.88
Trav6n-7A0A075B6A6 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Trav6n-7A0A075B6A6 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trav6n-7A0A075B6A6 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trav6n-7A0A075B6A6 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC20.54■□□□□ 0.88
Trav6n-7A0A075B6A6 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
Trav6n-7A0A075B6A6 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trav6n-7A0A075B6A6 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trav6n-7A0A075B6A6 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Trav6n-7A0A075B6A6 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Trav6n-7A0A075B6A6 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Trav6n-7A0A075B6A6 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trav6n-7A0A075B6A6 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trav6n-7A0A075B6A6 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trav6n-7A0A075B6A6 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Trav6n-7A0A075B6A6 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC20.51■□□□□ 0.87
Trav6n-7A0A075B6A6 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trav6n-7A0A075B6A6 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trav6n-7A0A075B6A6 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
Trav6n-7A0A075B6A6 Pcf11-205ENSMUST00000208255 1720 ntBASIC20.48■□□□□ 0.87
Trav6n-7A0A075B6A6 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trav6n-7A0A075B6A6 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trav6n-7A0A075B6A6 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trav6n-7A0A075B6A6 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC20.47■□□□□ 0.87
Trav6n-7A0A075B6A6 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trav6n-7A0A075B6A6 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Trav6n-7A0A075B6A6 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC20.45■□□□□ 0.86
Trav6n-7A0A075B6A6 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC20.45■□□□□ 0.86
Trav6n-7A0A075B6A6 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Trav6n-7A0A075B6A6 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC20.43■□□□□ 0.86
Trav6n-7A0A075B6A6 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Trav6n-7A0A075B6A6 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trav6n-7A0A075B6A6 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trav6n-7A0A075B6A6 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trav6n-7A0A075B6A6 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trav6n-7A0A075B6A6 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trav6n-7A0A075B6A6 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trav6n-7A0A075B6A6 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Trav6n-7A0A075B6A6 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Trav6n-7A0A075B6A6 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trav6n-7A0A075B6A6 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trav6n-7A0A075B6A6 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trav6n-7A0A075B6A6 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trav6n-7A0A075B6A6 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
Trav6n-7A0A075B6A6 Gm9939-201ENSMUST00000067161 1154 ntBASIC20.37■□□□□ 0.85
Trav6n-7A0A075B6A6 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Trav6n-7A0A075B6A6 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
Trav6n-7A0A075B6A6 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trav6n-7A0A075B6A6 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms