Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 C2orf69P4-201ENST00000565394 541 ntBASIC20.06■□□□□ 0.8
CSNK1G3Q9Y6M4 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
CSNK1G3Q9Y6M4 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC20.06■□□□□ 0.8
CSNK1G3Q9Y6M4 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CSNK1G3Q9Y6M4 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CSNK1G3Q9Y6M4 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC20.05■□□□□ 0.8
CSNK1G3Q9Y6M4 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC20.05■□□□□ 0.8
CSNK1G3Q9Y6M4 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CSNK1G3Q9Y6M4 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CSNK1G3Q9Y6M4 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CSNK1G3Q9Y6M4 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CSNK1G3Q9Y6M4 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CSNK1G3Q9Y6M4 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
CSNK1G3Q9Y6M4 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
CSNK1G3Q9Y6M4 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC20.05■□□□□ 0.8
CSNK1G3Q9Y6M4 RNF121-214ENST00000533380 870 ntTSL 3 BASIC20.05■□□□□ 0.8
CSNK1G3Q9Y6M4 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC20.05■□□□□ 0.8
CSNK1G3Q9Y6M4 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CSNK1G3Q9Y6M4 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
CSNK1G3Q9Y6M4 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC20.05■□□□□ 0.8
CSNK1G3Q9Y6M4 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CSNK1G3Q9Y6M4 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
CSNK1G3Q9Y6M4 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CSNK1G3Q9Y6M4 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
CSNK1G3Q9Y6M4 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC20.04■□□□□ 0.8
CSNK1G3Q9Y6M4 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CSNK1G3Q9Y6M4 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
CSNK1G3Q9Y6M4 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC20.04■□□□□ 0.8
CSNK1G3Q9Y6M4 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CSNK1G3Q9Y6M4 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CSNK1G3Q9Y6M4 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CSNK1G3Q9Y6M4 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC20.04■□□□□ 0.8
CSNK1G3Q9Y6M4 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC20.04■□□□□ 0.8
CSNK1G3Q9Y6M4 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CSNK1G3Q9Y6M4 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC20.04■□□□□ 0.8
CSNK1G3Q9Y6M4 SOX15-203ENST00000570788 1093 ntBASIC20.04■□□□□ 0.8
CSNK1G3Q9Y6M4 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC20.04■□□□□ 0.8
CSNK1G3Q9Y6M4 RN7SL471P-201ENST00000580476 299 ntBASIC20.04■□□□□ 0.8
CSNK1G3Q9Y6M4 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC20.04■□□□□ 0.8
CSNK1G3Q9Y6M4 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CSNK1G3Q9Y6M4 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CSNK1G3Q9Y6M4 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CSNK1G3Q9Y6M4 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CSNK1G3Q9Y6M4 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CSNK1G3Q9Y6M4 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CSNK1G3Q9Y6M4 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC20.04■□□□□ 0.8
CSNK1G3Q9Y6M4 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.04■□□□□ 0.8
CSNK1G3Q9Y6M4 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CSNK1G3Q9Y6M4 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CSNK1G3Q9Y6M4 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CSNK1G3Q9Y6M4 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC20.03■□□□□ 0.8
CSNK1G3Q9Y6M4 AC007375.3-201ENST00000600936 2314 ntBASIC20.03■□□□□ 0.8
CSNK1G3Q9Y6M4 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CSNK1G3Q9Y6M4 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CSNK1G3Q9Y6M4 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CSNK1G3Q9Y6M4 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC20.03■□□□□ 0.8
CSNK1G3Q9Y6M4 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CSNK1G3Q9Y6M4 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CSNK1G3Q9Y6M4 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
CSNK1G3Q9Y6M4 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC20.03■□□□□ 0.8
CSNK1G3Q9Y6M4 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC20.03■□□□□ 0.8
CSNK1G3Q9Y6M4 RPPH1-201ENST00000516869 333 ntBASIC20.03■□□□□ 0.8
CSNK1G3Q9Y6M4 USP36-216ENST00000589424 970 ntTSL 5 BASIC20.03■□□□□ 0.8
CSNK1G3Q9Y6M4 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC20.03■□□□□ 0.8
CSNK1G3Q9Y6M4 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
CSNK1G3Q9Y6M4 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CSNK1G3Q9Y6M4 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CSNK1G3Q9Y6M4 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC20.03■□□□□ 0.8
CSNK1G3Q9Y6M4 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CSNK1G3Q9Y6M4 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CSNK1G3Q9Y6M4 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CSNK1G3Q9Y6M4 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
CSNK1G3Q9Y6M4 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CSNK1G3Q9Y6M4 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CSNK1G3Q9Y6M4 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CSNK1G3Q9Y6M4 MME-217ENST00000616757 1315 ntTSL 5 BASIC20.02■□□□□ 0.8
CSNK1G3Q9Y6M4 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CSNK1G3Q9Y6M4 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
CSNK1G3Q9Y6M4 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CSNK1G3Q9Y6M4 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CSNK1G3Q9Y6M4 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
CSNK1G3Q9Y6M4 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CSNK1G3Q9Y6M4 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CSNK1G3Q9Y6M4 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.8
CSNK1G3Q9Y6M4 PEX7-202ENST00000367756 680 ntTSL 3 BASIC20.02■□□□□ 0.8
CSNK1G3Q9Y6M4 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
CSNK1G3Q9Y6M4 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CSNK1G3Q9Y6M4 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CSNK1G3Q9Y6M4 AC008550.1-201ENST00000511500 884 ntBASIC20.02■□□□□ 0.8
CSNK1G3Q9Y6M4 RHOD-202ENST00000532559 538 ntTSL 3 BASIC20.02■□□□□ 0.8
CSNK1G3Q9Y6M4 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC20.02■□□□□ 0.8
CSNK1G3Q9Y6M4 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CSNK1G3Q9Y6M4 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC20.02■□□□□ 0.8
CSNK1G3Q9Y6M4 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.02■□□□□ 0.8
CSNK1G3Q9Y6M4 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
CSNK1G3Q9Y6M4 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.79
CSNK1G3Q9Y6M4 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CSNK1G3Q9Y6M4 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC20.01■□□□□ 0.79
CSNK1G3Q9Y6M4 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC20.01■□□□□ 0.79
CSNK1G3Q9Y6M4 POM121L13P-201ENST00000422362 380 ntBASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms