Protein–RNA interactions for Protein: Q9Y5I7

CLDN16, Claudin-16, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN16Q9Y5I7 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLDN16Q9Y5I7 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLDN16Q9Y5I7 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLDN16Q9Y5I7 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
CLDN16Q9Y5I7 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLDN16Q9Y5I7 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC19.1■□□□□ 0.65
CLDN16Q9Y5I7 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLDN16Q9Y5I7 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLDN16Q9Y5I7 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
CLDN16Q9Y5I7 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLDN16Q9Y5I7 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLDN16Q9Y5I7 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLDN16Q9Y5I7 AC007225.1-201ENST00000566331 1836 ntBASIC19.1■□□□□ 0.65
CLDN16Q9Y5I7 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC19.1■□□□□ 0.65
CLDN16Q9Y5I7 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC19.1■□□□□ 0.65
CLDN16Q9Y5I7 AC091874.3-201ENST00000512672 1195 ntBASIC19.1■□□□□ 0.65
CLDN16Q9Y5I7 KLF13-207ENST00000560473 489 ntTSL 3 BASIC19.1■□□□□ 0.65
CLDN16Q9Y5I7 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC19.1■□□□□ 0.65
CLDN16Q9Y5I7 AL589743.5-201ENST00000616611 1050 ntBASIC19.1■□□□□ 0.65
CLDN16Q9Y5I7 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLDN16Q9Y5I7 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC19.1■□□□□ 0.65
CLDN16Q9Y5I7 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC19.1■□□□□ 0.65
CLDN16Q9Y5I7 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC19.09■□□□□ 0.65
CLDN16Q9Y5I7 BID-203ENST00000399765 1879 ntTSL 2 BASIC19.09■□□□□ 0.65
CLDN16Q9Y5I7 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CLDN16Q9Y5I7 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
CLDN16Q9Y5I7 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CLDN16Q9Y5I7 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
CLDN16Q9Y5I7 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
CLDN16Q9Y5I7 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CLDN16Q9Y5I7 DUSP5P2-201ENST00000426873 1033 ntBASIC19.09■□□□□ 0.65
CLDN16Q9Y5I7 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC19.09■□□□□ 0.65
CLDN16Q9Y5I7 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
CLDN16Q9Y5I7 AC133041.1-202ENST00000642053 222 ntBASIC19.09■□□□□ 0.65
CLDN16Q9Y5I7 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CLDN16Q9Y5I7 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CLDN16Q9Y5I7 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CLDN16Q9Y5I7 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CLDN16Q9Y5I7 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CLDN16Q9Y5I7 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CLDN16Q9Y5I7 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
CLDN16Q9Y5I7 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
CLDN16Q9Y5I7 LSM12P1-201ENST00000411836 588 ntBASIC19.08■□□□□ 0.64
CLDN16Q9Y5I7 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CLDN16Q9Y5I7 OR2A1-AS1-201ENST00000462305 773 ntBASIC19.08■□□□□ 0.64
CLDN16Q9Y5I7 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC19.08■□□□□ 0.64
CLDN16Q9Y5I7 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC19.08■□□□□ 0.64
CLDN16Q9Y5I7 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CLDN16Q9Y5I7 AC083880.1-201ENST00000608266 535 ntBASIC19.08■□□□□ 0.64
CLDN16Q9Y5I7 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
CLDN16Q9Y5I7 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CLDN16Q9Y5I7 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
CLDN16Q9Y5I7 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CLDN16Q9Y5I7 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC19.08■□□□□ 0.64
CLDN16Q9Y5I7 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CLDN16Q9Y5I7 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CLDN16Q9Y5I7 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CLDN16Q9Y5I7 FP700111.2-201ENST00000619190 1892 ntBASIC19.07■□□□□ 0.64
CLDN16Q9Y5I7 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CLDN16Q9Y5I7 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CLDN16Q9Y5I7 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CLDN16Q9Y5I7 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
CLDN16Q9Y5I7 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CLDN16Q9Y5I7 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC19.07■□□□□ 0.64
CLDN16Q9Y5I7 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
CLDN16Q9Y5I7 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CLDN16Q9Y5I7 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CLDN16Q9Y5I7 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC19.07■□□□□ 0.64
CLDN16Q9Y5I7 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
CLDN16Q9Y5I7 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC19.07■□□□□ 0.64
CLDN16Q9Y5I7 BET1L-207ENST00000529614 560 ntTSL 5 BASIC19.07■□□□□ 0.64
CLDN16Q9Y5I7 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC19.07■□□□□ 0.64
CLDN16Q9Y5I7 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC19.07■□□□□ 0.64
CLDN16Q9Y5I7 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC19.07■□□□□ 0.64
CLDN16Q9Y5I7 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC19.07■□□□□ 0.64
CLDN16Q9Y5I7 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CLDN16Q9Y5I7 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
CLDN16Q9Y5I7 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CLDN16Q9Y5I7 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CLDN16Q9Y5I7 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CLDN16Q9Y5I7 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC19.07■□□□□ 0.64
CLDN16Q9Y5I7 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
CLDN16Q9Y5I7 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CLDN16Q9Y5I7 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CLDN16Q9Y5I7 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC19.06■□□□□ 0.64
CLDN16Q9Y5I7 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC19.06■□□□□ 0.64
CLDN16Q9Y5I7 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC19.06■□□□□ 0.64
CLDN16Q9Y5I7 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CLDN16Q9Y5I7 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CLDN16Q9Y5I7 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.06■□□□□ 0.64
CLDN16Q9Y5I7 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CLDN16Q9Y5I7 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC19.06■□□□□ 0.64
CLDN16Q9Y5I7 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC19.06■□□□□ 0.64
CLDN16Q9Y5I7 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
CLDN16Q9Y5I7 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC19.06■□□□□ 0.64
CLDN16Q9Y5I7 APTR-205ENST00000447009 902 ntTSL 2 BASIC19.06■□□□□ 0.64
CLDN16Q9Y5I7 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CLDN16Q9Y5I7 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC19.06■□□□□ 0.64
CLDN16Q9Y5I7 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CLDN16Q9Y5I7 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms