Protein–RNA interactions for Protein: Q9UKI2

CDC42EP3, Cdc42 effector protein 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3Q9UKI2 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDC42EP3Q9UKI2 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CDC42EP3Q9UKI2 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CDC42EP3Q9UKI2 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
CDC42EP3Q9UKI2 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDC42EP3Q9UKI2 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CDC42EP3Q9UKI2 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC17.06■□□□□ 0.32
CDC42EP3Q9UKI2 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CDC42EP3Q9UKI2 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDC42EP3Q9UKI2 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC17.06■□□□□ 0.32
CDC42EP3Q9UKI2 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
CDC42EP3Q9UKI2 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC17.06■□□□□ 0.32
CDC42EP3Q9UKI2 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
CDC42EP3Q9UKI2 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDC42EP3Q9UKI2 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDC42EP3Q9UKI2 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
CDC42EP3Q9UKI2 AC211429.1-201ENST00000415277 523 ntBASIC17.06■□□□□ 0.32
CDC42EP3Q9UKI2 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC17.06■□□□□ 0.32
CDC42EP3Q9UKI2 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CDC42EP3Q9UKI2 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC17.06■□□□□ 0.32
CDC42EP3Q9UKI2 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC17.06■□□□□ 0.32
CDC42EP3Q9UKI2 SPIB-206ENST00000596074 847 ntTSL 2 BASIC17.06■□□□□ 0.32
CDC42EP3Q9UKI2 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC17.06■□□□□ 0.32
CDC42EP3Q9UKI2 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CDC42EP3Q9UKI2 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDC42EP3Q9UKI2 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC17.06■□□□□ 0.32
CDC42EP3Q9UKI2 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC17.06■□□□□ 0.32
CDC42EP3Q9UKI2 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CDC42EP3Q9UKI2 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
CDC42EP3Q9UKI2 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
CDC42EP3Q9UKI2 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CDC42EP3Q9UKI2 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDC42EP3Q9UKI2 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDC42EP3Q9UKI2 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
CDC42EP3Q9UKI2 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDC42EP3Q9UKI2 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC17.05■□□□□ 0.32
CDC42EP3Q9UKI2 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
CDC42EP3Q9UKI2 SNORA78-201ENST00000459373 127 ntBASIC17.05■□□□□ 0.32
CDC42EP3Q9UKI2 CDV3P1-201ENST00000471403 739 ntBASIC17.05■□□□□ 0.32
CDC42EP3Q9UKI2 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC17.05■□□□□ 0.32
CDC42EP3Q9UKI2 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC17.05■□□□□ 0.32
CDC42EP3Q9UKI2 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC17.05■□□□□ 0.32
CDC42EP3Q9UKI2 RN7SL471P-201ENST00000580476 299 ntBASIC17.05■□□□□ 0.32
CDC42EP3Q9UKI2 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC17.05■□□□□ 0.32
CDC42EP3Q9UKI2 FAM21FP-204ENST00000608637 956 ntBASIC17.05■□□□□ 0.32
CDC42EP3Q9UKI2 AC010331.1-201ENST00000611423 582 ntBASIC17.05■□□□□ 0.32
CDC42EP3Q9UKI2 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC17.05■□□□□ 0.32
CDC42EP3Q9UKI2 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC17.05■□□□□ 0.32
CDC42EP3Q9UKI2 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDC42EP3Q9UKI2 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
CDC42EP3Q9UKI2 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
CDC42EP3Q9UKI2 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
CDC42EP3Q9UKI2 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC17.05■□□□□ 0.32
CDC42EP3Q9UKI2 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDC42EP3Q9UKI2 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC17.05■□□□□ 0.32
CDC42EP3Q9UKI2 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDC42EP3Q9UKI2 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC17.04■□□□□ 0.32
CDC42EP3Q9UKI2 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CDC42EP3Q9UKI2 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDC42EP3Q9UKI2 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC17.04■□□□□ 0.32
CDC42EP3Q9UKI2 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDC42EP3Q9UKI2 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDC42EP3Q9UKI2 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDC42EP3Q9UKI2 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
CDC42EP3Q9UKI2 PNMA6B-201ENST00000538162 1200 ntBASIC17.04■□□□□ 0.32
CDC42EP3Q9UKI2 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC17.04■□□□□ 0.32
CDC42EP3Q9UKI2 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDC42EP3Q9UKI2 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
CDC42EP3Q9UKI2 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CDC42EP3Q9UKI2 KRT17P1-201ENST00000399211 1546 ntBASIC17.04■□□□□ 0.32
CDC42EP3Q9UKI2 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDC42EP3Q9UKI2 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDC42EP3Q9UKI2 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDC42EP3Q9UKI2 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC17.04■□□□□ 0.32
CDC42EP3Q9UKI2 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC17.04■□□□□ 0.32
CDC42EP3Q9UKI2 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC17.04■□□□□ 0.32
CDC42EP3Q9UKI2 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC17.03■□□□□ 0.32
CDC42EP3Q9UKI2 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC17.03■□□□□ 0.32
CDC42EP3Q9UKI2 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
CDC42EP3Q9UKI2 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC17.03■□□□□ 0.32
CDC42EP3Q9UKI2 AC092368.3-202ENST00000574180 1591 ntBASIC17.03■□□□□ 0.32
CDC42EP3Q9UKI2 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
CDC42EP3Q9UKI2 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDC42EP3Q9UKI2 RNF165-205ENST00000588679 2904 ntBASIC17.03■□□□□ 0.32
CDC42EP3Q9UKI2 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC17.03■□□□□ 0.32
CDC42EP3Q9UKI2 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
CDC42EP3Q9UKI2 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC17.03■□□□□ 0.32
CDC42EP3Q9UKI2 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CDC42EP3Q9UKI2 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CDC42EP3Q9UKI2 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
CDC42EP3Q9UKI2 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC17.03■□□□□ 0.32
CDC42EP3Q9UKI2 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC17.03■□□□□ 0.32
CDC42EP3Q9UKI2 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDC42EP3Q9UKI2 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
CDC42EP3Q9UKI2 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CDC42EP3Q9UKI2 FBXW4P1-201ENST00000426721 2239 ntBASIC17.02■□□□□ 0.32
CDC42EP3Q9UKI2 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
CDC42EP3Q9UKI2 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CDC42EP3Q9UKI2 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
CDC42EP3Q9UKI2 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 11.7 ms