Protein–RNA interactions for Protein: Q9P035

HACD3, Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3Q9P035 AC007322.1-201ENST00000426983 750 ntBASIC20.66■□□□□ 0.9
HACD3Q9P035 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
HACD3Q9P035 PARP1-210ENST00000629232 477 ntTSL 5 BASIC20.66■□□□□ 0.9
HACD3Q9P035 STAC-204ENST00000457375 1366 ntTSL 2 BASIC20.66■□□□□ 0.9
HACD3Q9P035 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
HACD3Q9P035 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HACD3Q9P035 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC20.66■□□□□ 0.9
HACD3Q9P035 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HACD3Q9P035 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20.66■□□□□ 0.9
HACD3Q9P035 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HACD3Q9P035 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HACD3Q9P035 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
HACD3Q9P035 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HACD3Q9P035 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
HACD3Q9P035 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
HACD3Q9P035 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
HACD3Q9P035 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC20.65■□□□□ 0.9
HACD3Q9P035 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC20.65■□□□□ 0.9
HACD3Q9P035 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC20.65■□□□□ 0.9
HACD3Q9P035 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HACD3Q9P035 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
HACD3Q9P035 AC004911.1-201ENST00000416316 871 ntBASIC20.65■□□□□ 0.9
HACD3Q9P035 CASP6-205ENST00000505486 538 ntTSL 4 BASIC20.65■□□□□ 0.9
HACD3Q9P035 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC20.65■□□□□ 0.9
HACD3Q9P035 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
HACD3Q9P035 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC20.65■□□□□ 0.9
HACD3Q9P035 AC080038.1-201ENST00000611274 1154 ntBASIC20.65■□□□□ 0.9
HACD3Q9P035 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC20.65■□□□□ 0.9
HACD3Q9P035 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HACD3Q9P035 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HACD3Q9P035 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
HACD3Q9P035 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
HACD3Q9P035 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
HACD3Q9P035 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC20.64■□□□□ 0.9
HACD3Q9P035 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
HACD3Q9P035 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC20.64■□□□□ 0.89
HACD3Q9P035 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
HACD3Q9P035 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
HACD3Q9P035 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC20.64■□□□□ 0.89
HACD3Q9P035 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
HACD3Q9P035 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
HACD3Q9P035 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC20.64■□□□□ 0.89
HACD3Q9P035 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
HACD3Q9P035 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC20.64■□□□□ 0.89
HACD3Q9P035 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC20.64■□□□□ 0.89
HACD3Q9P035 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC20.64■□□□□ 0.89
HACD3Q9P035 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
HACD3Q9P035 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
HACD3Q9P035 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
HACD3Q9P035 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HACD3Q9P035 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20.64■□□□□ 0.89
HACD3Q9P035 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
HACD3Q9P035 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HACD3Q9P035 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
HACD3Q9P035 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HACD3Q9P035 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
HACD3Q9P035 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HACD3Q9P035 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
HACD3Q9P035 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HACD3Q9P035 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HACD3Q9P035 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC20.63■□□□□ 0.89
HACD3Q9P035 BET1L-204ENST00000410108 637 ntTSL 3 BASIC20.63■□□□□ 0.89
HACD3Q9P035 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC20.63■□□□□ 0.89
HACD3Q9P035 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC20.63■□□□□ 0.89
HACD3Q9P035 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC20.63■□□□□ 0.89
HACD3Q9P035 VPS53-216ENST00000574029 585 ntTSL 4 BASIC20.63■□□□□ 0.89
HACD3Q9P035 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HACD3Q9P035 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
HACD3Q9P035 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
HACD3Q9P035 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC20.63■□□□□ 0.89
HACD3Q9P035 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HACD3Q9P035 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC20.63■□□□□ 0.89
HACD3Q9P035 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
HACD3Q9P035 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
HACD3Q9P035 AC068338.2-201ENST00000563278 1430 ntBASIC20.62■□□□□ 0.89
HACD3Q9P035 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC20.62■□□□□ 0.89
HACD3Q9P035 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
HACD3Q9P035 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
HACD3Q9P035 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HACD3Q9P035 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC20.62■□□□□ 0.89
HACD3Q9P035 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC20.62■□□□□ 0.89
HACD3Q9P035 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
HACD3Q9P035 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
HACD3Q9P035 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HACD3Q9P035 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
HACD3Q9P035 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
HACD3Q9P035 PLLP-204ENST00000569059 665 ntTSL 3 BASIC20.62■□□□□ 0.89
HACD3Q9P035 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HACD3Q9P035 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HACD3Q9P035 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
HACD3Q9P035 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
HACD3Q9P035 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
HACD3Q9P035 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HACD3Q9P035 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
HACD3Q9P035 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HACD3Q9P035 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HACD3Q9P035 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HACD3Q9P035 AC027702.1-201ENST00000563810 1770 ntBASIC20.62■□□□□ 0.89
HACD3Q9P035 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
HACD3Q9P035 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 122.5 ms