Protein–RNA interactions for Protein: Q9NYA1

SPHK1, Sphingosine kinase 1, humanhuman

Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1Q9NYA1 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC19.75■□□□□ 0.75
SPHK1Q9NYA1 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC19.74■□□□□ 0.75
SPHK1Q9NYA1 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SPHK1Q9NYA1 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SPHK1Q9NYA1 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SPHK1Q9NYA1 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SPHK1Q9NYA1 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SPHK1Q9NYA1 DUSP5P2-201ENST00000426873 1033 ntBASIC19.74■□□□□ 0.75
SPHK1Q9NYA1 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC19.74■□□□□ 0.75
SPHK1Q9NYA1 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
SPHK1Q9NYA1 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SPHK1Q9NYA1 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
SPHK1Q9NYA1 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SPHK1Q9NYA1 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SPHK1Q9NYA1 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
SPHK1Q9NYA1 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC19.74■□□□□ 0.75
SPHK1Q9NYA1 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC19.73■□□□□ 0.75
SPHK1Q9NYA1 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
SPHK1Q9NYA1 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SPHK1Q9NYA1 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
SPHK1Q9NYA1 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SPHK1Q9NYA1 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SPHK1Q9NYA1 AC091874.3-201ENST00000512672 1195 ntBASIC19.73■□□□□ 0.75
SPHK1Q9NYA1 BET1L-207ENST00000529614 560 ntTSL 5 BASIC19.73■□□□□ 0.75
SPHK1Q9NYA1 RGMA-211ENST00000557420 989 ntTSL 3 BASIC19.73■□□□□ 0.75
SPHK1Q9NYA1 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SPHK1Q9NYA1 AL589743.5-201ENST00000616611 1050 ntBASIC19.73■□□□□ 0.75
SPHK1Q9NYA1 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
SPHK1Q9NYA1 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
SPHK1Q9NYA1 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC19.73■□□□□ 0.75
SPHK1Q9NYA1 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC19.73■□□□□ 0.75
SPHK1Q9NYA1 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC19.73■□□□□ 0.75
SPHK1Q9NYA1 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
SPHK1Q9NYA1 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SPHK1Q9NYA1 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
SPHK1Q9NYA1 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SPHK1Q9NYA1 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
SPHK1Q9NYA1 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
SPHK1Q9NYA1 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC19.72■□□□□ 0.75
SPHK1Q9NYA1 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC19.72■□□□□ 0.75
SPHK1Q9NYA1 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
SPHK1Q9NYA1 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
SPHK1Q9NYA1 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC19.72■□□□□ 0.75
SPHK1Q9NYA1 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC19.72■□□□□ 0.75
SPHK1Q9NYA1 AC105020.6-201ENST00000621523 1217 ntBASIC19.72■□□□□ 0.75
SPHK1Q9NYA1 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
SPHK1Q9NYA1 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC19.72■□□□□ 0.75
SPHK1Q9NYA1 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC19.72■□□□□ 0.75
SPHK1Q9NYA1 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
SPHK1Q9NYA1 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SPHK1Q9NYA1 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
SPHK1Q9NYA1 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
SPHK1Q9NYA1 AC006128.1-201ENST00000624704 1661 ntBASIC19.71■□□□□ 0.75
SPHK1Q9NYA1 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SPHK1Q9NYA1 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SPHK1Q9NYA1 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
SPHK1Q9NYA1 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SPHK1Q9NYA1 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SPHK1Q9NYA1 SERPINH1P1-201ENST00000419794 1249 ntBASIC19.71■□□□□ 0.75
SPHK1Q9NYA1 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SPHK1Q9NYA1 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC19.71■□□□□ 0.75
SPHK1Q9NYA1 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC19.71■□□□□ 0.75
SPHK1Q9NYA1 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC19.71■□□□□ 0.75
SPHK1Q9NYA1 MIR2861-201ENST00000636310 90 ntBASIC19.71■□□□□ 0.75
SPHK1Q9NYA1 MYC-209ENST00000641252 345 ntBASIC19.71■□□□□ 0.75
SPHK1Q9NYA1 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SPHK1Q9NYA1 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC19.71■□□□□ 0.75
SPHK1Q9NYA1 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SPHK1Q9NYA1 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC19.71■□□□□ 0.75
SPHK1Q9NYA1 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC19.71■□□□□ 0.75
SPHK1Q9NYA1 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC19.7■□□□□ 0.74
SPHK1Q9NYA1 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SPHK1Q9NYA1 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
SPHK1Q9NYA1 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SPHK1Q9NYA1 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SPHK1Q9NYA1 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
SPHK1Q9NYA1 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SPHK1Q9NYA1 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SPHK1Q9NYA1 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
SPHK1Q9NYA1 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SPHK1Q9NYA1 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SPHK1Q9NYA1 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
SPHK1Q9NYA1 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SPHK1Q9NYA1 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
SPHK1Q9NYA1 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
SPHK1Q9NYA1 RHEB-204ENST00000472642 900 ntTSL 3 BASIC19.7■□□□□ 0.74
SPHK1Q9NYA1 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC19.7■□□□□ 0.74
SPHK1Q9NYA1 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC19.7■□□□□ 0.74
SPHK1Q9NYA1 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC19.7■□□□□ 0.74
SPHK1Q9NYA1 AC083880.1-201ENST00000608266 535 ntBASIC19.7■□□□□ 0.74
SPHK1Q9NYA1 AL356652.1-201ENST00000615962 565 ntBASIC19.7■□□□□ 0.74
SPHK1Q9NYA1 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC19.7■□□□□ 0.74
SPHK1Q9NYA1 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SPHK1Q9NYA1 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SPHK1Q9NYA1 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SPHK1Q9NYA1 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
SPHK1Q9NYA1 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SPHK1Q9NYA1 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SPHK1Q9NYA1 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SPHK1Q9NYA1 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms