Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
NEUROD4Q9HD90 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
NEUROD4Q9HD90 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC19.28■□□□□ 0.68
NEUROD4Q9HD90 RBM17P2-201ENST00000616397 1405 ntBASIC19.28■□□□□ 0.68
NEUROD4Q9HD90 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NEUROD4Q9HD90 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC19.28■□□□□ 0.68
NEUROD4Q9HD90 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.28■□□□□ 0.68
NEUROD4Q9HD90 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
NEUROD4Q9HD90 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC19.28■□□□□ 0.68
NEUROD4Q9HD90 CD44-222ENST00000526025 1052 ntTSL 2 BASIC19.28■□□□□ 0.68
NEUROD4Q9HD90 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC19.28■□□□□ 0.68
NEUROD4Q9HD90 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC19.28■□□□□ 0.68
NEUROD4Q9HD90 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC19.28■□□□□ 0.68
NEUROD4Q9HD90 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
NEUROD4Q9HD90 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NEUROD4Q9HD90 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NEUROD4Q9HD90 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
NEUROD4Q9HD90 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NEUROD4Q9HD90 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NEUROD4Q9HD90 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.28■□□□□ 0.68
NEUROD4Q9HD90 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC19.28■□□□□ 0.68
NEUROD4Q9HD90 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
NEUROD4Q9HD90 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
NEUROD4Q9HD90 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NEUROD4Q9HD90 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
NEUROD4Q9HD90 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NEUROD4Q9HD90 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC19.27■□□□□ 0.68
NEUROD4Q9HD90 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC19.27■□□□□ 0.68
NEUROD4Q9HD90 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
NEUROD4Q9HD90 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC19.27■□□□□ 0.68
NEUROD4Q9HD90 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.27■□□□□ 0.68
NEUROD4Q9HD90 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.27■□□□□ 0.68
NEUROD4Q9HD90 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
NEUROD4Q9HD90 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC19.27■□□□□ 0.68
NEUROD4Q9HD90 DET1-207ENST00000564406 2315 ntTSL 2 BASIC19.27■□□□□ 0.68
NEUROD4Q9HD90 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC19.27■□□□□ 0.68
NEUROD4Q9HD90 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
NEUROD4Q9HD90 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
NEUROD4Q9HD90 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NEUROD4Q9HD90 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
NEUROD4Q9HD90 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NEUROD4Q9HD90 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
NEUROD4Q9HD90 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
NEUROD4Q9HD90 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
NEUROD4Q9HD90 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
NEUROD4Q9HD90 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NEUROD4Q9HD90 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC19.27■□□□□ 0.67
NEUROD4Q9HD90 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC19.27■□□□□ 0.67
NEUROD4Q9HD90 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.27■□□□□ 0.67
NEUROD4Q9HD90 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
NEUROD4Q9HD90 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NEUROD4Q9HD90 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
NEUROD4Q9HD90 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
NEUROD4Q9HD90 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NEUROD4Q9HD90 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
NEUROD4Q9HD90 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NEUROD4Q9HD90 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC19.26■□□□□ 0.67
NEUROD4Q9HD90 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC19.26■□□□□ 0.67
NEUROD4Q9HD90 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
NEUROD4Q9HD90 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
NEUROD4Q9HD90 HACD1-201ENST00000326961 773 ntTSL 2 BASIC19.26■□□□□ 0.67
NEUROD4Q9HD90 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
NEUROD4Q9HD90 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC19.26■□□□□ 0.67
NEUROD4Q9HD90 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC19.26■□□□□ 0.67
NEUROD4Q9HD90 AC091799.1-201ENST00000422823 811 ntBASIC19.26■□□□□ 0.67
NEUROD4Q9HD90 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC19.26■□□□□ 0.67
NEUROD4Q9HD90 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC19.26■□□□□ 0.67
NEUROD4Q9HD90 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC19.26■□□□□ 0.67
NEUROD4Q9HD90 TFG-210ENST00000620299 1289 ntTSL 5 BASIC19.26■□□□□ 0.67
NEUROD4Q9HD90 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NEUROD4Q9HD90 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
NEUROD4Q9HD90 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
NEUROD4Q9HD90 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NEUROD4Q9HD90 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NEUROD4Q9HD90 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC19.26■□□□□ 0.67
NEUROD4Q9HD90 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.26■□□□□ 0.67
NEUROD4Q9HD90 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NEUROD4Q9HD90 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
NEUROD4Q9HD90 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
NEUROD4Q9HD90 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC19.25■□□□□ 0.67
NEUROD4Q9HD90 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
NEUROD4Q9HD90 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NEUROD4Q9HD90 SLC25A24-204ENST00000569674 2357 ntBASIC19.25■□□□□ 0.67
NEUROD4Q9HD90 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NEUROD4Q9HD90 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC19.25■□□□□ 0.67
NEUROD4Q9HD90 AC092720.2-201ENST00000602388 1665 ntBASIC19.25■□□□□ 0.67
NEUROD4Q9HD90 AC007322.3-201ENST00000426526 701 ntBASIC19.25■□□□□ 0.67
NEUROD4Q9HD90 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC19.25■□□□□ 0.67
NEUROD4Q9HD90 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
NEUROD4Q9HD90 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC19.25■□□□□ 0.67
NEUROD4Q9HD90 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC19.25■□□□□ 0.67
NEUROD4Q9HD90 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC19.25■□□□□ 0.67
NEUROD4Q9HD90 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC19.25■□□□□ 0.67
NEUROD4Q9HD90 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
NEUROD4Q9HD90 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC19.25■□□□□ 0.67
NEUROD4Q9HD90 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
NEUROD4Q9HD90 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC19.25■□□□□ 0.67
NEUROD4Q9HD90 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
NEUROD4Q9HD90 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC19.25■□□□□ 0.67
NEUROD4Q9HD90 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms