Protein–RNA interactions for Protein: Q9H9Y6

POLR1B, DNA-directed RNA polymerase I subunit RPA2, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1BQ9H9Y6 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
POLR1BQ9H9Y6 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC20.17■□□□□ 0.82
POLR1BQ9H9Y6 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC20.17■□□□□ 0.82
POLR1BQ9H9Y6 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC20.17■□□□□ 0.82
POLR1BQ9H9Y6 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
POLR1BQ9H9Y6 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
POLR1BQ9H9Y6 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.16■□□□□ 0.82
POLR1BQ9H9Y6 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
POLR1BQ9H9Y6 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC20.16■□□□□ 0.82
POLR1BQ9H9Y6 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
POLR1BQ9H9Y6 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC20.16■□□□□ 0.82
POLR1BQ9H9Y6 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC20.16■□□□□ 0.82
POLR1BQ9H9Y6 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
POLR1BQ9H9Y6 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
POLR1BQ9H9Y6 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
POLR1BQ9H9Y6 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC20.16■□□□□ 0.82
POLR1BQ9H9Y6 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC20.16■□□□□ 0.82
POLR1BQ9H9Y6 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC20.16■□□□□ 0.82
POLR1BQ9H9Y6 AL591742.1-201ENST00000604433 565 ntBASIC20.16■□□□□ 0.82
POLR1BQ9H9Y6 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
POLR1BQ9H9Y6 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC20.16■□□□□ 0.82
POLR1BQ9H9Y6 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
POLR1BQ9H9Y6 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
POLR1BQ9H9Y6 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
POLR1BQ9H9Y6 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
POLR1BQ9H9Y6 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
POLR1BQ9H9Y6 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
POLR1BQ9H9Y6 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
POLR1BQ9H9Y6 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
POLR1BQ9H9Y6 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
POLR1BQ9H9Y6 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
POLR1BQ9H9Y6 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
POLR1BQ9H9Y6 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
POLR1BQ9H9Y6 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
POLR1BQ9H9Y6 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
POLR1BQ9H9Y6 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
POLR1BQ9H9Y6 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC20.15■□□□□ 0.82
POLR1BQ9H9Y6 AC128676.1-201ENST00000454392 318 ntBASIC20.15■□□□□ 0.82
POLR1BQ9H9Y6 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC20.15■□□□□ 0.82
POLR1BQ9H9Y6 AC010980.2-201ENST00000587099 1412 ntBASIC20.15■□□□□ 0.82
POLR1BQ9H9Y6 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC20.15■□□□□ 0.82
POLR1BQ9H9Y6 LINC01521-201ENST00000504184 1943 ntBASIC20.15■□□□□ 0.82
POLR1BQ9H9Y6 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
POLR1BQ9H9Y6 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
POLR1BQ9H9Y6 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.15■□□□□ 0.82
POLR1BQ9H9Y6 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
POLR1BQ9H9Y6 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
POLR1BQ9H9Y6 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.15■□□□□ 0.82
POLR1BQ9H9Y6 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
POLR1BQ9H9Y6 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.14■□□□□ 0.81
POLR1BQ9H9Y6 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC20.14■□□□□ 0.81
POLR1BQ9H9Y6 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
POLR1BQ9H9Y6 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
POLR1BQ9H9Y6 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC20.14■□□□□ 0.81
POLR1BQ9H9Y6 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC20.14■□□□□ 0.81
POLR1BQ9H9Y6 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC20.14■□□□□ 0.81
POLR1BQ9H9Y6 RPS2P4-201ENST00000476944 856 ntBASIC20.14■□□□□ 0.81
POLR1BQ9H9Y6 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC20.14■□□□□ 0.81
POLR1BQ9H9Y6 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC20.14■□□□□ 0.81
POLR1BQ9H9Y6 INO80E-214ENST00000620599 515 ntTSL 2 BASIC20.14■□□□□ 0.81
POLR1BQ9H9Y6 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
POLR1BQ9H9Y6 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
POLR1BQ9H9Y6 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
POLR1BQ9H9Y6 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.14■□□□□ 0.81
POLR1BQ9H9Y6 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC20.13■□□□□ 0.81
POLR1BQ9H9Y6 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
POLR1BQ9H9Y6 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
POLR1BQ9H9Y6 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
POLR1BQ9H9Y6 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
POLR1BQ9H9Y6 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
POLR1BQ9H9Y6 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
POLR1BQ9H9Y6 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
POLR1BQ9H9Y6 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
POLR1BQ9H9Y6 RNF146-206ENST00000480444 843 ntTSL 2 BASIC20.13■□□□□ 0.81
POLR1BQ9H9Y6 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC20.13■□□□□ 0.81
POLR1BQ9H9Y6 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
POLR1BQ9H9Y6 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
POLR1BQ9H9Y6 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
POLR1BQ9H9Y6 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
POLR1BQ9H9Y6 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
POLR1BQ9H9Y6 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
POLR1BQ9H9Y6 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC20.12■□□□□ 0.81
POLR1BQ9H9Y6 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC20.12■□□□□ 0.81
POLR1BQ9H9Y6 KRT16P2-201ENST00000414673 1423 ntBASIC20.12■□□□□ 0.81
POLR1BQ9H9Y6 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
POLR1BQ9H9Y6 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
POLR1BQ9H9Y6 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC20.12■□□□□ 0.81
POLR1BQ9H9Y6 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
POLR1BQ9H9Y6 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC20.12■□□□□ 0.81
POLR1BQ9H9Y6 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
POLR1BQ9H9Y6 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC20.12■□□□□ 0.81
POLR1BQ9H9Y6 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC20.12■□□□□ 0.81
POLR1BQ9H9Y6 PBX1-209ENST00000485769 834 ntTSL 2 BASIC20.12■□□□□ 0.81
POLR1BQ9H9Y6 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC20.12■□□□□ 0.81
POLR1BQ9H9Y6 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
POLR1BQ9H9Y6 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC20.12■□□□□ 0.81
POLR1BQ9H9Y6 MMD2-204ENST00000612910 778 ntTSL 5 BASIC20.12■□□□□ 0.81
POLR1BQ9H9Y6 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.12■□□□□ 0.81
POLR1BQ9H9Y6 AC087742.1-201ENST00000575880 1738 ntBASIC20.12■□□□□ 0.81
POLR1BQ9H9Y6 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC20.12■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms