Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
SMARCC2Q8TAQ2 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC24■■□□□ 1.43
SMARCC2Q8TAQ2 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC23.99■■□□□ 1.43
SMARCC2Q8TAQ2 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC23.99■■□□□ 1.43
SMARCC2Q8TAQ2 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
SMARCC2Q8TAQ2 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC23.99■■□□□ 1.43
SMARCC2Q8TAQ2 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
SMARCC2Q8TAQ2 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC23.99■■□□□ 1.43
SMARCC2Q8TAQ2 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC23.99■■□□□ 1.43
SMARCC2Q8TAQ2 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC23.99■■□□□ 1.43
SMARCC2Q8TAQ2 ID1-201ENST00000376105 1233 ntBASIC23.99■■□□□ 1.43
SMARCC2Q8TAQ2 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC23.99■■□□□ 1.43
SMARCC2Q8TAQ2 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC23.99■■□□□ 1.43
SMARCC2Q8TAQ2 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC23.99■■□□□ 1.43
SMARCC2Q8TAQ2 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC23.99■■□□□ 1.43
SMARCC2Q8TAQ2 AC005181.1-201ENST00000604782 1256 ntBASIC23.99■■□□□ 1.43
SMARCC2Q8TAQ2 FGF8-207ENST00000618991 856 ntTSL 3 BASIC23.99■■□□□ 1.43
SMARCC2Q8TAQ2 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
SMARCC2Q8TAQ2 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC23.99■■□□□ 1.43
SMARCC2Q8TAQ2 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
SMARCC2Q8TAQ2 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC23.99■■□□□ 1.43
SMARCC2Q8TAQ2 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC23.99■■□□□ 1.43
SMARCC2Q8TAQ2 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC23.99■■□□□ 1.43
SMARCC2Q8TAQ2 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC23.99■■□□□ 1.43
SMARCC2Q8TAQ2 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC23.99■■□□□ 1.43
SMARCC2Q8TAQ2 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC23.99■■□□□ 1.43
SMARCC2Q8TAQ2 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
SMARCC2Q8TAQ2 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC23.98■■□□□ 1.43
SMARCC2Q8TAQ2 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
SMARCC2Q8TAQ2 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
SMARCC2Q8TAQ2 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
SMARCC2Q8TAQ2 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC23.98■■□□□ 1.43
SMARCC2Q8TAQ2 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
SMARCC2Q8TAQ2 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC23.98■■□□□ 1.43
SMARCC2Q8TAQ2 AC243732.1-201ENST00000612648 864 ntBASIC23.98■■□□□ 1.43
SMARCC2Q8TAQ2 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
SMARCC2Q8TAQ2 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC23.98■■□□□ 1.43
SMARCC2Q8TAQ2 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC23.98■■□□□ 1.43
SMARCC2Q8TAQ2 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
SMARCC2Q8TAQ2 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
SMARCC2Q8TAQ2 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC23.98■■□□□ 1.43
SMARCC2Q8TAQ2 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC23.98■■□□□ 1.43
SMARCC2Q8TAQ2 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
SMARCC2Q8TAQ2 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
SMARCC2Q8TAQ2 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
SMARCC2Q8TAQ2 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC23.97■■□□□ 1.43
SMARCC2Q8TAQ2 PTPA-214ENST00000423100 988 ntTSL 2 BASIC23.97■■□□□ 1.43
SMARCC2Q8TAQ2 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC23.97■■□□□ 1.43
SMARCC2Q8TAQ2 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC23.97■■□□□ 1.43
SMARCC2Q8TAQ2 AL121603.2-201ENST00000557373 2117 ntBASIC23.97■■□□□ 1.43
SMARCC2Q8TAQ2 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC23.97■■□□□ 1.43
SMARCC2Q8TAQ2 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC23.97■■□□□ 1.43
SMARCC2Q8TAQ2 RBM17P2-201ENST00000616397 1405 ntBASIC23.97■■□□□ 1.43
SMARCC2Q8TAQ2 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
SMARCC2Q8TAQ2 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
SMARCC2Q8TAQ2 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC23.97■■□□□ 1.43
SMARCC2Q8TAQ2 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC23.96■■□□□ 1.43
SMARCC2Q8TAQ2 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC23.96■■□□□ 1.43
SMARCC2Q8TAQ2 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC23.96■■□□□ 1.43
SMARCC2Q8TAQ2 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC23.96■■□□□ 1.43
SMARCC2Q8TAQ2 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC23.96■■□□□ 1.43
SMARCC2Q8TAQ2 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC23.96■■□□□ 1.43
SMARCC2Q8TAQ2 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC23.96■■□□□ 1.43
SMARCC2Q8TAQ2 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
SMARCC2Q8TAQ2 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
SMARCC2Q8TAQ2 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC23.96■■□□□ 1.43
SMARCC2Q8TAQ2 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC23.96■■□□□ 1.43
SMARCC2Q8TAQ2 AC091799.1-201ENST00000422823 811 ntBASIC23.96■■□□□ 1.43
SMARCC2Q8TAQ2 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC23.96■■□□□ 1.43
SMARCC2Q8TAQ2 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC23.96■■□□□ 1.43
SMARCC2Q8TAQ2 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC23.96■■□□□ 1.43
SMARCC2Q8TAQ2 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC23.96■■□□□ 1.43
SMARCC2Q8TAQ2 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC23.96■■□□□ 1.43
SMARCC2Q8TAQ2 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC23.96■■□□□ 1.43
SMARCC2Q8TAQ2 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
SMARCC2Q8TAQ2 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
SMARCC2Q8TAQ2 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
SMARCC2Q8TAQ2 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
SMARCC2Q8TAQ2 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
SMARCC2Q8TAQ2 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC23.96■■□□□ 1.43
SMARCC2Q8TAQ2 AC116050.2-201ENST00000612102 1779 ntBASIC23.96■■□□□ 1.43
SMARCC2Q8TAQ2 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
SMARCC2Q8TAQ2 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC23.95■■□□□ 1.43
SMARCC2Q8TAQ2 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
SMARCC2Q8TAQ2 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
SMARCC2Q8TAQ2 SLC25A24-204ENST00000569674 2357 ntBASIC23.95■■□□□ 1.43
SMARCC2Q8TAQ2 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC23.95■■□□□ 1.42
SMARCC2Q8TAQ2 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC23.95■■□□□ 1.42
SMARCC2Q8TAQ2 HLA-L-209ENST00000420110 1011 ntBASIC23.95■■□□□ 1.42
SMARCC2Q8TAQ2 MAP2K4P1-201ENST00000438453 1195 ntBASIC23.95■■□□□ 1.42
SMARCC2Q8TAQ2 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC23.95■■□□□ 1.42
SMARCC2Q8TAQ2 AL050303.2-201ENST00000619798 666 ntBASIC23.95■■□□□ 1.42
SMARCC2Q8TAQ2 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC23.95■■□□□ 1.42
SMARCC2Q8TAQ2 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC23.95■■□□□ 1.42
SMARCC2Q8TAQ2 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
SMARCC2Q8TAQ2 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC23.95■■□□□ 1.42
SMARCC2Q8TAQ2 DET1-207ENST00000564406 2315 ntTSL 2 BASIC23.95■■□□□ 1.42
SMARCC2Q8TAQ2 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC23.95■■□□□ 1.42
SMARCC2Q8TAQ2 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
SMARCC2Q8TAQ2 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms