Protein–RNA interactions for Protein: Q8N1L1

LINC00528, Putative uncharacterized protein encoded by LINC00528, humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00528Q8N1L1 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LINC00528Q8N1L1 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC13.42□□□□□ -0.26
LINC00528Q8N1L1 MFF-203ENST00000349901 1716 ntTSL 2 BASIC13.42□□□□□ -0.26
LINC00528Q8N1L1 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
LINC00528Q8N1L1 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
LINC00528Q8N1L1 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LINC00528Q8N1L1 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
LINC00528Q8N1L1 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC13.42□□□□□ -0.26
LINC00528Q8N1L1 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC13.42□□□□□ -0.26
LINC00528Q8N1L1 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC13.42□□□□□ -0.26
LINC00528Q8N1L1 AF201337.1-201ENST00000520239 748 ntBASIC13.42□□□□□ -0.26
LINC00528Q8N1L1 AC105036.2-201ENST00000569468 176 ntBASIC13.42□□□□□ -0.26
LINC00528Q8N1L1 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC13.42□□□□□ -0.26
LINC00528Q8N1L1 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
LINC00528Q8N1L1 AC066615.1-201ENST00000640911 628 ntBASIC13.42□□□□□ -0.26
LINC00528Q8N1L1 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
LINC00528Q8N1L1 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC13.42□□□□□ -0.26
LINC00528Q8N1L1 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
LINC00528Q8N1L1 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
LINC00528Q8N1L1 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LINC00528Q8N1L1 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
LINC00528Q8N1L1 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LINC00528Q8N1L1 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC13.42□□□□□ -0.26
LINC00528Q8N1L1 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
LINC00528Q8N1L1 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
LINC00528Q8N1L1 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
LINC00528Q8N1L1 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LINC00528Q8N1L1 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
LINC00528Q8N1L1 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LINC00528Q8N1L1 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC13.41□□□□□ -0.26
LINC00528Q8N1L1 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC13.41□□□□□ -0.26
LINC00528Q8N1L1 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC13.41□□□□□ -0.26
LINC00528Q8N1L1 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LINC00528Q8N1L1 AP000568.1-201ENST00000282964 442 ntBASIC13.41□□□□□ -0.26
LINC00528Q8N1L1 FXN-202ENST00000396364 980 ntTSL 5 BASIC13.41□□□□□ -0.26
LINC00528Q8N1L1 FRGCA-201ENST00000424933 422 ntTSL 3 BASIC13.41□□□□□ -0.26
LINC00528Q8N1L1 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC13.41□□□□□ -0.26
LINC00528Q8N1L1 AC069152.1-201ENST00000438030 544 ntBASIC13.41□□□□□ -0.26
LINC00528Q8N1L1 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC13.41□□□□□ -0.26
LINC00528Q8N1L1 IMMP2L-204ENST00000447215 1164 ntTSL 3 BASIC13.41□□□□□ -0.26
LINC00528Q8N1L1 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC13.41□□□□□ -0.26
LINC00528Q8N1L1 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
LINC00528Q8N1L1 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC13.41□□□□□ -0.26
LINC00528Q8N1L1 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
LINC00528Q8N1L1 RAB30-AS1-205ENST00000530270 1116 ntTSL 2 BASIC13.41□□□□□ -0.26
LINC00528Q8N1L1 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC13.41□□□□□ -0.26
LINC00528Q8N1L1 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC13.41□□□□□ -0.26
LINC00528Q8N1L1 AC006213.5-201ENST00000619673 288 ntBASIC13.41□□□□□ -0.26
LINC00528Q8N1L1 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LINC00528Q8N1L1 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LINC00528Q8N1L1 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC13.41□□□□□ -0.26
LINC00528Q8N1L1 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LINC00528Q8N1L1 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
LINC00528Q8N1L1 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
LINC00528Q8N1L1 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC13.41□□□□□ -0.26
LINC00528Q8N1L1 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC13.41□□□□□ -0.26
LINC00528Q8N1L1 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LINC00528Q8N1L1 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LINC00528Q8N1L1 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC13.4□□□□□ -0.26
LINC00528Q8N1L1 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LINC00528Q8N1L1 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC13.4□□□□□ -0.26
LINC00528Q8N1L1 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
LINC00528Q8N1L1 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
LINC00528Q8N1L1 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
LINC00528Q8N1L1 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
LINC00528Q8N1L1 SMIM26-201ENST00000411646 505 ntAPPRIS P5 TSL 1 (best) BASIC13.4□□□□□ -0.26
LINC00528Q8N1L1 SMIM26-202ENST00000435844 575 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
LINC00528Q8N1L1 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC13.4□□□□□ -0.26
LINC00528Q8N1L1 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC13.4□□□□□ -0.26
LINC00528Q8N1L1 HMGB1P8-201ENST00000558211 949 ntBASIC13.4□□□□□ -0.26
LINC00528Q8N1L1 AC020892.1-201ENST00000559918 855 ntTSL 2 BASIC13.4□□□□□ -0.26
LINC00528Q8N1L1 AC022558.1-201ENST00000560450 454 ntTSL 3 BASIC13.4□□□□□ -0.26
LINC00528Q8N1L1 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC13.4□□□□□ -0.26
LINC00528Q8N1L1 AC133041.1-202ENST00000642053 222 ntBASIC13.4□□□□□ -0.26
LINC00528Q8N1L1 AC026471.6-201ENST00000622954 1905 ntBASIC13.4□□□□□ -0.26
LINC00528Q8N1L1 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC13.4□□□□□ -0.26
LINC00528Q8N1L1 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC13.4□□□□□ -0.26
LINC00528Q8N1L1 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC13.4□□□□□ -0.26
LINC00528Q8N1L1 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
LINC00528Q8N1L1 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC13.4□□□□□ -0.26
LINC00528Q8N1L1 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC13.4□□□□□ -0.26
LINC00528Q8N1L1 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC13.4□□□□□ -0.27
LINC00528Q8N1L1 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
LINC00528Q8N1L1 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
LINC00528Q8N1L1 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC13.39□□□□□ -0.27
LINC00528Q8N1L1 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
LINC00528Q8N1L1 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
LINC00528Q8N1L1 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
LINC00528Q8N1L1 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
LINC00528Q8N1L1 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
LINC00528Q8N1L1 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
LINC00528Q8N1L1 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
LINC00528Q8N1L1 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LINC00528Q8N1L1 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LINC00528Q8N1L1 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
LINC00528Q8N1L1 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LINC00528Q8N1L1 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
LINC00528Q8N1L1 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
LINC00528Q8N1L1 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
LINC00528Q8N1L1 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms