Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC116Q8IYX3 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC19.28■□□□□ 0.68
CCDC116Q8IYX3 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC116Q8IYX3 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC19.27■□□□□ 0.68
CCDC116Q8IYX3 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
CCDC116Q8IYX3 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC116Q8IYX3 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC116Q8IYX3 AL121603.2-201ENST00000557373 2117 ntBASIC19.27■□□□□ 0.68
CCDC116Q8IYX3 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC19.27■□□□□ 0.68
CCDC116Q8IYX3 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
CCDC116Q8IYX3 PARL-206ENST00000435888 1098 ntTSL 5 BASIC19.27■□□□□ 0.68
CCDC116Q8IYX3 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC19.27■□□□□ 0.68
CCDC116Q8IYX3 DUX4L16-201ENST00000555130 1264 ntBASIC19.27■□□□□ 0.68
CCDC116Q8IYX3 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC19.27■□□□□ 0.68
CCDC116Q8IYX3 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
CCDC116Q8IYX3 AL591742.1-201ENST00000604433 565 ntBASIC19.27■□□□□ 0.68
CCDC116Q8IYX3 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC19.27■□□□□ 0.68
CCDC116Q8IYX3 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19.27■□□□□ 0.68
CCDC116Q8IYX3 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC116Q8IYX3 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC116Q8IYX3 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
CCDC116Q8IYX3 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
CCDC116Q8IYX3 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
CCDC116Q8IYX3 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CCDC116Q8IYX3 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
CCDC116Q8IYX3 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
CCDC116Q8IYX3 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC19.26■□□□□ 0.67
CCDC116Q8IYX3 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC116Q8IYX3 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC116Q8IYX3 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC19.26■□□□□ 0.67
CCDC116Q8IYX3 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC116Q8IYX3 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC19.26■□□□□ 0.67
CCDC116Q8IYX3 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC19.26■□□□□ 0.67
CCDC116Q8IYX3 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC116Q8IYX3 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC19.26■□□□□ 0.67
CCDC116Q8IYX3 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC116Q8IYX3 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
CCDC116Q8IYX3 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC116Q8IYX3 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC116Q8IYX3 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC19.26■□□□□ 0.67
CCDC116Q8IYX3 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC19.26■□□□□ 0.67
CCDC116Q8IYX3 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
CCDC116Q8IYX3 BID-214ENST00000617586 542 ntTSL 5 BASIC19.26■□□□□ 0.67
CCDC116Q8IYX3 AC013268.1-206ENST00000638368 961 ntBASIC19.26■□□□□ 0.67
CCDC116Q8IYX3 AC112229.1-201ENST00000639295 961 ntBASIC19.26■□□□□ 0.67
CCDC116Q8IYX3 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC116Q8IYX3 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC116Q8IYX3 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC19.26■□□□□ 0.67
CCDC116Q8IYX3 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC116Q8IYX3 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC116Q8IYX3 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC19.26■□□□□ 0.67
CCDC116Q8IYX3 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC19.26■□□□□ 0.67
CCDC116Q8IYX3 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC116Q8IYX3 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC19.25■□□□□ 0.67
CCDC116Q8IYX3 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
CCDC116Q8IYX3 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC19.25■□□□□ 0.67
CCDC116Q8IYX3 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC116Q8IYX3 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC116Q8IYX3 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC19.25■□□□□ 0.67
CCDC116Q8IYX3 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
CCDC116Q8IYX3 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC116Q8IYX3 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
CCDC116Q8IYX3 AP005212.1-201ENST00000581547 1997 ntBASIC19.25■□□□□ 0.67
CCDC116Q8IYX3 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC19.25■□□□□ 0.67
CCDC116Q8IYX3 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC116Q8IYX3 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
CCDC116Q8IYX3 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC19.25■□□□□ 0.67
CCDC116Q8IYX3 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC19.25■□□□□ 0.67
CCDC116Q8IYX3 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC19.25■□□□□ 0.67
CCDC116Q8IYX3 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC116Q8IYX3 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC19.25■□□□□ 0.67
CCDC116Q8IYX3 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
CCDC116Q8IYX3 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC116Q8IYX3 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
CCDC116Q8IYX3 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
CCDC116Q8IYX3 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC116Q8IYX3 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC19.25■□□□□ 0.67
CCDC116Q8IYX3 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
CCDC116Q8IYX3 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC116Q8IYX3 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC116Q8IYX3 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC116Q8IYX3 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC19.24■□□□□ 0.67
CCDC116Q8IYX3 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC19.24■□□□□ 0.67
CCDC116Q8IYX3 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC116Q8IYX3 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC116Q8IYX3 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC116Q8IYX3 LINC01521-201ENST00000504184 1943 ntBASIC19.24■□□□□ 0.67
CCDC116Q8IYX3 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC116Q8IYX3 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC116Q8IYX3 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC116Q8IYX3 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC116Q8IYX3 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC116Q8IYX3 SAPCD2P1-201ENST00000395413 1184 ntBASIC19.24■□□□□ 0.67
CCDC116Q8IYX3 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC19.24■□□□□ 0.67
CCDC116Q8IYX3 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC19.24■□□□□ 0.67
CCDC116Q8IYX3 IKBKGP1-201ENST00000612193 1073 ntBASIC19.24■□□□□ 0.67
CCDC116Q8IYX3 MIR2861-201ENST00000636310 90 ntBASIC19.24■□□□□ 0.67
CCDC116Q8IYX3 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.24■□□□□ 0.67
CCDC116Q8IYX3 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC116Q8IYX3 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms