Protein–RNA interactions for Protein: Q86WS4

C12orf40, Uncharacterized protein C12orf40, humanhuman

Predictions only

Length 652 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf40Q86WS4 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
C12orf40Q86WS4 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
C12orf40Q86WS4 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
C12orf40Q86WS4 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC20.91■□□□□ 0.94
C12orf40Q86WS4 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
C12orf40Q86WS4 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
C12orf40Q86WS4 AC008550.1-201ENST00000511500 884 ntBASIC20.91■□□□□ 0.94
C12orf40Q86WS4 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC20.91■□□□□ 0.94
C12orf40Q86WS4 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
C12orf40Q86WS4 AL356652.1-201ENST00000615962 565 ntBASIC20.91■□□□□ 0.94
C12orf40Q86WS4 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
C12orf40Q86WS4 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC20.9■□□□□ 0.94
C12orf40Q86WS4 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
C12orf40Q86WS4 FBXW4P1-201ENST00000426721 2239 ntBASIC20.9■□□□□ 0.94
C12orf40Q86WS4 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
C12orf40Q86WS4 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
C12orf40Q86WS4 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
C12orf40Q86WS4 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
C12orf40Q86WS4 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.9■□□□□ 0.94
C12orf40Q86WS4 MME-217ENST00000616757 1315 ntTSL 5 BASIC20.9■□□□□ 0.94
C12orf40Q86WS4 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC20.9■□□□□ 0.94
C12orf40Q86WS4 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
C12orf40Q86WS4 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
C12orf40Q86WS4 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
C12orf40Q86WS4 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC20.9■□□□□ 0.94
C12orf40Q86WS4 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.9■□□□□ 0.94
C12orf40Q86WS4 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
C12orf40Q86WS4 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC20.89■□□□□ 0.94
C12orf40Q86WS4 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
C12orf40Q86WS4 POM121L13P-201ENST00000422362 380 ntBASIC20.89■□□□□ 0.93
C12orf40Q86WS4 UBE2SP1-201ENST00000450587 669 ntBASIC20.89■□□□□ 0.93
C12orf40Q86WS4 FAM197Y4-202ENST00000622692 608 ntBASIC20.89■□□□□ 0.93
C12orf40Q86WS4 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC20.89■□□□□ 0.93
C12orf40Q86WS4 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC20.89■□□□□ 0.93
C12orf40Q86WS4 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
C12orf40Q86WS4 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
C12orf40Q86WS4 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
C12orf40Q86WS4 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
C12orf40Q86WS4 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC20.89■□□□□ 0.93
C12orf40Q86WS4 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC20.89■□□□□ 0.93
C12orf40Q86WS4 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
C12orf40Q86WS4 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC20.88■□□□□ 0.93
C12orf40Q86WS4 Z98882.1-201ENST00000622160 2253 ntBASIC20.88■□□□□ 0.93
C12orf40Q86WS4 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC20.88■□□□□ 0.93
C12orf40Q86WS4 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
C12orf40Q86WS4 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
C12orf40Q86WS4 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC20.88■□□□□ 0.93
C12orf40Q86WS4 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC20.88■□□□□ 0.93
C12orf40Q86WS4 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC20.88■□□□□ 0.93
C12orf40Q86WS4 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC20.88■□□□□ 0.93
C12orf40Q86WS4 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC20.88■□□□□ 0.93
C12orf40Q86WS4 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC20.88■□□□□ 0.93
C12orf40Q86WS4 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
C12orf40Q86WS4 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
C12orf40Q86WS4 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC20.88■□□□□ 0.93
C12orf40Q86WS4 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
C12orf40Q86WS4 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
C12orf40Q86WS4 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC20.88■□□□□ 0.93
C12orf40Q86WS4 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
C12orf40Q86WS4 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC20.88■□□□□ 0.93
C12orf40Q86WS4 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC20.88■□□□□ 0.93
C12orf40Q86WS4 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC20.87■□□□□ 0.93
C12orf40Q86WS4 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
C12orf40Q86WS4 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
C12orf40Q86WS4 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
C12orf40Q86WS4 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
C12orf40Q86WS4 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
C12orf40Q86WS4 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
C12orf40Q86WS4 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
C12orf40Q86WS4 PGM5P4-201ENST00000421970 445 ntBASIC20.87■□□□□ 0.93
C12orf40Q86WS4 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC20.87■□□□□ 0.93
C12orf40Q86WS4 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC20.87■□□□□ 0.93
C12orf40Q86WS4 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
C12orf40Q86WS4 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC20.87■□□□□ 0.93
C12orf40Q86WS4 AC006557.6-201ENST00000623071 864 ntBASIC20.87■□□□□ 0.93
C12orf40Q86WS4 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
C12orf40Q86WS4 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC20.87■□□□□ 0.93
C12orf40Q86WS4 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC20.87■□□□□ 0.93
C12orf40Q86WS4 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC20.87■□□□□ 0.93
C12orf40Q86WS4 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
C12orf40Q86WS4 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
C12orf40Q86WS4 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC20.86■□□□□ 0.93
C12orf40Q86WS4 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
C12orf40Q86WS4 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
C12orf40Q86WS4 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
C12orf40Q86WS4 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC20.86■□□□□ 0.93
C12orf40Q86WS4 PARN-205ENST00000539279 1557 ntTSL 2 BASIC20.86■□□□□ 0.93
C12orf40Q86WS4 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
C12orf40Q86WS4 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC20.86■□□□□ 0.93
C12orf40Q86WS4 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
C12orf40Q86WS4 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
C12orf40Q86WS4 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC20.86■□□□□ 0.93
C12orf40Q86WS4 BRWD1-AS2-201ENST00000603064 1028 ntBASIC20.86■□□□□ 0.93
C12orf40Q86WS4 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
C12orf40Q86WS4 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
C12orf40Q86WS4 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
C12orf40Q86WS4 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
C12orf40Q86WS4 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.85■□□□□ 0.93
C12orf40Q86WS4 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
C12orf40Q86WS4 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms