Protein–RNA interactions for Protein: Q76B58

BRINP3, BMP/retinoic acid-inducible neural-specific protein 3, humanhuman

Predictions only

Length 766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRINP3Q76B58 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
BRINP3Q76B58 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC28.21■■■□□ 2.11
BRINP3Q76B58 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC28.21■■■□□ 2.11
BRINP3Q76B58 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
BRINP3Q76B58 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
BRINP3Q76B58 SLC25A3P1-201ENST00000443844 931 ntBASIC28.21■■■□□ 2.11
BRINP3Q76B58 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC28.21■■■□□ 2.11
BRINP3Q76B58 AC087388.1-201ENST00000571370 1112 ntBASIC28.21■■■□□ 2.11
BRINP3Q76B58 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC28.21■■■□□ 2.11
BRINP3Q76B58 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC28.21■■■□□ 2.11
BRINP3Q76B58 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC28.21■■■□□ 2.11
BRINP3Q76B58 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC28.21■■■□□ 2.11
BRINP3Q76B58 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC28.21■■■□□ 2.11
BRINP3Q76B58 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC28.2■■■□□ 2.11
BRINP3Q76B58 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
BRINP3Q76B58 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC28.2■■■□□ 2.1
BRINP3Q76B58 HES2-206ENST00000489730 730 ntTSL 2 BASIC28.2■■■□□ 2.1
BRINP3Q76B58 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC28.2■■■□□ 2.1
BRINP3Q76B58 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
BRINP3Q76B58 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
BRINP3Q76B58 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC28.2■■■□□ 2.1
BRINP3Q76B58 AC010542.4-201ENST00000563151 1910 ntBASIC28.2■■■□□ 2.1
BRINP3Q76B58 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
BRINP3Q76B58 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
BRINP3Q76B58 KRT18P22-201ENST00000402024 1347 ntBASIC28.19■■■□□ 2.1
BRINP3Q76B58 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC28.19■■■□□ 2.1
BRINP3Q76B58 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
BRINP3Q76B58 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC28.19■■■□□ 2.1
BRINP3Q76B58 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
BRINP3Q76B58 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC28.19■■■□□ 2.1
BRINP3Q76B58 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
BRINP3Q76B58 AL390955.1-201ENST00000428694 934 ntBASIC28.19■■■□□ 2.1
BRINP3Q76B58 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
BRINP3Q76B58 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC28.19■■■□□ 2.1
BRINP3Q76B58 WWOX-216ENST00000569818 525 ntBASIC28.19■■■□□ 2.1
BRINP3Q76B58 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC28.19■■■□□ 2.1
BRINP3Q76B58 AL121829.2-201ENST00000620908 328 ntBASIC28.19■■■□□ 2.1
BRINP3Q76B58 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC28.19■■■□□ 2.1
BRINP3Q76B58 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC28.19■■■□□ 2.1
BRINP3Q76B58 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
BRINP3Q76B58 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
BRINP3Q76B58 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC28.18■■■□□ 2.1
BRINP3Q76B58 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC28.18■■■□□ 2.1
BRINP3Q76B58 NAPSB-206ENST00000562112 1266 ntBASIC28.18■■■□□ 2.1
BRINP3Q76B58 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC28.18■■■□□ 2.1
BRINP3Q76B58 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC28.18■■■□□ 2.1
BRINP3Q76B58 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC28.18■■■□□ 2.1
BRINP3Q76B58 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC28.18■■■□□ 2.1
BRINP3Q76B58 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
BRINP3Q76B58 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC28.18■■■□□ 2.1
BRINP3Q76B58 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
BRINP3Q76B58 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC28.18■■■□□ 2.1
BRINP3Q76B58 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC28.17■■■□□ 2.1
BRINP3Q76B58 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
BRINP3Q76B58 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
BRINP3Q76B58 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
BRINP3Q76B58 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC28.17■■■□□ 2.1
BRINP3Q76B58 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC28.17■■■□□ 2.1
BRINP3Q76B58 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC28.17■■■□□ 2.1
BRINP3Q76B58 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
BRINP3Q76B58 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
BRINP3Q76B58 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC28.17■■■□□ 2.1
BRINP3Q76B58 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
BRINP3Q76B58 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
BRINP3Q76B58 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
BRINP3Q76B58 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
BRINP3Q76B58 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC28.16■■■□□ 2.1
BRINP3Q76B58 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC28.16■■■□□ 2.1
BRINP3Q76B58 FITM1-202ENST00000559294 800 ntBASIC28.16■■■□□ 2.1
BRINP3Q76B58 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC28.16■■■□□ 2.1
BRINP3Q76B58 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC28.16■■■□□ 2.1
BRINP3Q76B58 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
BRINP3Q76B58 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
BRINP3Q76B58 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC28.16■■■□□ 2.1
BRINP3Q76B58 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
BRINP3Q76B58 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC28.16■■■□□ 2.1
BRINP3Q76B58 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
BRINP3Q76B58 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC28.15■■■□□ 2.1
BRINP3Q76B58 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC28.15■■■□□ 2.1
BRINP3Q76B58 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC28.15■■■□□ 2.1
BRINP3Q76B58 F2R-202ENST00000505600 442 ntTSL 2 BASIC28.15■■■□□ 2.1
BRINP3Q76B58 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC28.15■■■□□ 2.1
BRINP3Q76B58 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
BRINP3Q76B58 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC28.15■■■□□ 2.1
BRINP3Q76B58 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC28.15■■■□□ 2.1
BRINP3Q76B58 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC28.15■■■□□ 2.1
BRINP3Q76B58 NBPF21P-201ENST00000425093 1451 ntBASIC28.15■■■□□ 2.1
BRINP3Q76B58 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC28.14■■■□□ 2.1
BRINP3Q76B58 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
BRINP3Q76B58 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
BRINP3Q76B58 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC28.14■■■□□ 2.1
BRINP3Q76B58 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
BRINP3Q76B58 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC28.14■■■□□ 2.1
BRINP3Q76B58 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
BRINP3Q76B58 TMA16-209ENST00000513272 803 ntTSL 2 BASIC28.14■■■□□ 2.1
BRINP3Q76B58 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
BRINP3Q76B58 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC28.14■■■□□ 2.09
BRINP3Q76B58 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC28.13■■■□□ 2.09
BRINP3Q76B58 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC28.13■■■□□ 2.09
BRINP3Q76B58 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms