Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC13.92□□□□□ -0.18
VPS13DQ5THJ4 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC13.92□□□□□ -0.18
VPS13DQ5THJ4 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
VPS13DQ5THJ4 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC13.92□□□□□ -0.18
VPS13DQ5THJ4 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
VPS13DQ5THJ4 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC13.91□□□□□ -0.18
VPS13DQ5THJ4 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
VPS13DQ5THJ4 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC13.91□□□□□ -0.18
VPS13DQ5THJ4 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
VPS13DQ5THJ4 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC13.91□□□□□ -0.18
VPS13DQ5THJ4 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
VPS13DQ5THJ4 Six3os1_6.1-201ENST00000620790 196 ntBASIC13.91□□□□□ -0.18
VPS13DQ5THJ4 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
VPS13DQ5THJ4 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
VPS13DQ5THJ4 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
VPS13DQ5THJ4 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC13.91□□□□□ -0.18
VPS13DQ5THJ4 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
VPS13DQ5THJ4 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
VPS13DQ5THJ4 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC13.91□□□□□ -0.18
VPS13DQ5THJ4 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
VPS13DQ5THJ4 REXO1L10P-201ENST00000615707 1290 ntBASIC13.91□□□□□ -0.18
VPS13DQ5THJ4 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
VPS13DQ5THJ4 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
VPS13DQ5THJ4 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
VPS13DQ5THJ4 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
VPS13DQ5THJ4 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
VPS13DQ5THJ4 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
VPS13DQ5THJ4 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC13.91□□□□□ -0.18
VPS13DQ5THJ4 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC13.91□□□□□ -0.18
VPS13DQ5THJ4 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC13.91□□□□□ -0.18
VPS13DQ5THJ4 MIR6786-201ENST00000616843 113 ntBASIC13.91□□□□□ -0.18
VPS13DQ5THJ4 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC13.91□□□□□ -0.18
VPS13DQ5THJ4 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC13.91□□□□□ -0.18
VPS13DQ5THJ4 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
VPS13DQ5THJ4 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC13.9□□□□□ -0.18
VPS13DQ5THJ4 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC13.9□□□□□ -0.18
VPS13DQ5THJ4 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC13.9□□□□□ -0.18
VPS13DQ5THJ4 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
VPS13DQ5THJ4 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC13.9□□□□□ -0.18
VPS13DQ5THJ4 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC13.9□□□□□ -0.18
VPS13DQ5THJ4 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC13.9□□□□□ -0.18
VPS13DQ5THJ4 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
VPS13DQ5THJ4 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
VPS13DQ5THJ4 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
VPS13DQ5THJ4 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC13.9□□□□□ -0.18
VPS13DQ5THJ4 KRT8P36-201ENST00000489121 1440 ntBASIC13.9□□□□□ -0.18
VPS13DQ5THJ4 AL135905.2-201ENST00000584934 1404 ntBASIC13.9□□□□□ -0.18
VPS13DQ5THJ4 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC13.9□□□□□ -0.18
VPS13DQ5THJ4 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
VPS13DQ5THJ4 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
VPS13DQ5THJ4 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
VPS13DQ5THJ4 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
VPS13DQ5THJ4 KRT17P2-201ENST00000300992 1314 ntBASIC13.9□□□□□ -0.19
VPS13DQ5THJ4 TMPOP1-202ENST00000424642 1267 ntBASIC13.9□□□□□ -0.19
VPS13DQ5THJ4 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC13.9□□□□□ -0.19
VPS13DQ5THJ4 RBM42-202ENST00000586618 771 ntTSL 3 BASIC13.9□□□□□ -0.19
VPS13DQ5THJ4 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC13.9□□□□□ -0.19
VPS13DQ5THJ4 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC13.89□□□□□ -0.19
VPS13DQ5THJ4 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
VPS13DQ5THJ4 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
VPS13DQ5THJ4 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
VPS13DQ5THJ4 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
VPS13DQ5THJ4 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
VPS13DQ5THJ4 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC13.89□□□□□ -0.19
VPS13DQ5THJ4 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC13.89□□□□□ -0.19
VPS13DQ5THJ4 TK2-213ENST00000563369 882 ntTSL 5 BASIC13.89□□□□□ -0.19
VPS13DQ5THJ4 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC13.89□□□□□ -0.19
VPS13DQ5THJ4 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
VPS13DQ5THJ4 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
VPS13DQ5THJ4 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC13.89□□□□□ -0.19
VPS13DQ5THJ4 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
VPS13DQ5THJ4 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
VPS13DQ5THJ4 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
VPS13DQ5THJ4 AP003071.4-201ENST00000562276 1284 ntBASIC13.89□□□□□ -0.19
VPS13DQ5THJ4 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC13.89□□□□□ -0.19
VPS13DQ5THJ4 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
VPS13DQ5THJ4 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
VPS13DQ5THJ4 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
VPS13DQ5THJ4 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
VPS13DQ5THJ4 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
VPS13DQ5THJ4 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
VPS13DQ5THJ4 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
VPS13DQ5THJ4 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
VPS13DQ5THJ4 KRT18P35-201ENST00000510488 1269 ntBASIC13.88□□□□□ -0.19
VPS13DQ5THJ4 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC13.88□□□□□ -0.19
VPS13DQ5THJ4 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC13.88□□□□□ -0.19
VPS13DQ5THJ4 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
VPS13DQ5THJ4 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
VPS13DQ5THJ4 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
VPS13DQ5THJ4 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC13.88□□□□□ -0.19
VPS13DQ5THJ4 CFL2-205ENST00000555765 632 ntTSL 2 BASIC13.88□□□□□ -0.19
VPS13DQ5THJ4 AC092865.7-201ENST00000641832 219 ntBASIC13.88□□□□□ -0.19
VPS13DQ5THJ4 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
VPS13DQ5THJ4 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
VPS13DQ5THJ4 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
VPS13DQ5THJ4 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
VPS13DQ5THJ4 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
VPS13DQ5THJ4 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
VPS13DQ5THJ4 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC13.88□□□□□ -0.19
VPS13DQ5THJ4 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 8.2 ms