Protein–RNA interactions for Protein: Q12200

NCR1, NPC intracellular cholesterol transporter 1-related protein 1, yeastyeast

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NCR1Q12200 MSS11YMR164C 2277 nt4.79□□□□□ -1.64
NCR1Q12200 PDR15YDR406W 4590 nt4.79□□□□□ -1.64
NCR1Q12200 YCR087C-AYCR087C-A 462 nt4.79□□□□□ -1.64
NCR1Q12200 ZIP1YDR285W 2628 nt4.79□□□□□ -1.64
NCR1Q12200 ARK1YNL020C 1917 nt4.79□□□□□ -1.64
NCR1Q12200 RAD16YBR114W 2373 nt4.79□□□□□ -1.64
NCR1Q12200 SIR3YLR442C 2937 nt4.79□□□□□ -1.64
NCR1Q12200 IRC3YDR332W 2070 nt4.78□□□□□ -1.64
NCR1Q12200 YDR182W-AYDR182W-A 204 nt4.78□□□□□ -1.64
NCR1Q12200 TRX1YLR043C 312 nt4.78□□□□□ -1.64
NCR1Q12200 ADP1YCR011C 3150 nt4.78□□□□□ -1.64
NCR1Q12200 NNK1YKL171W 2787 nt4.77□□□□□ -1.65
NCR1Q12200 SWC3YAL011W 1878 nt4.77□□□□□ -1.65
NCR1Q12200 YBR206WYBR206W 324 nt4.77□□□□□ -1.65
NCR1Q12200 FAA3YIL009W 2085 nt4.77□□□□□ -1.65
NCR1Q12200 AKL1YBR059C 3327 nt4.77□□□□□ -1.65
NCR1Q12200 PAN1YIR006C 4443 nt4.77□□□□□ -1.65
NCR1Q12200 APC2YLR127C 2562 nt4.76□□□□□ -1.65
NCR1Q12200 TDA1YMR291W 1761 nt4.76□□□□□ -1.65
NCR1Q12200 MSC7YHR039C 1935 nt4.76□□□□□ -1.65
NCR1Q12200 FOX2YKR009C 2703 nt4.76□□□□□ -1.65
NCR1Q12200 MBP1YDL056W 2502 nt4.76□□□□□ -1.65
NCR1Q12200 ESF1YDR365C 1887 nt4.75□□□□□ -1.65
NCR1Q12200 FRT2YAL028W 1587 nt4.75□□□□□ -1.65
NCR1Q12200 YFR012W-AYFR012W-A 87 nt4.75□□□□□ -1.65
NCR1Q12200 GDH2YDL215C 3279 nt4.75□□□□□ -1.65
NCR1Q12200 SLD3YGL113W 2007 nt4.75□□□□□ -1.65
NCR1Q12200 MSH4YFL003C 2637 nt4.75□□□□□ -1.65
NCR1Q12200 YBL028CYBL028C 321 nt4.74□□□□□ -1.65
NCR1Q12200 PHO87YCR037C 2772 nt4.74□□□□□ -1.65
NCR1Q12200 CWH43YCR017C 2862 nt4.74□□□□□ -1.65
NCR1Q12200 TIF4632YGL049C 2745 nt4.74□□□□□ -1.65
NCR1Q12200 CDC24YAL041W 2565 nt4.73□□□□□ -1.65
NCR1Q12200 GAL4YPL248C 2646 nt4.73□□□□□ -1.65
NCR1Q12200 YDL041WYDL041W 354 nt4.73□□□□□ -1.65
NCR1Q12200 YIL059CYIL059C 366 nt4.73□□□□□ -1.65
NCR1Q12200 NCE101YJL205C 162 nt4.73□□□□□ -1.65
NCR1Q12200 RAM2YKL019W 951 nt4.73□□□□□ -1.65
NCR1Q12200 YML007C-AYML007C-A 111 nt4.73□□□□□ -1.65
NCR1Q12200 CMC4YMR194C-B 222 nt4.73□□□□□ -1.65
NCR1Q12200 PHM7YOL084W 2976 nt4.72□□□□□ -1.65
NCR1Q12200 STF2YGR008C 255 nt4.72□□□□□ -1.65
NCR1Q12200 HOT1YMR172W 2160 nt4.72□□□□□ -1.65
NCR1Q12200 GAC1YOR178C 2382 nt4.72□□□□□ -1.65
NCR1Q12200 ABF1YKL112W 2196 nt4.71□□□□□ -1.65
NCR1Q12200 NCL1YBL024W 2055 nt4.71□□□□□ -1.65
NCR1Q12200 YDL242WYDL242W 354 nt4.71□□□□□ -1.66
NCR1Q12200 YAE1YJR067C 426 nt4.71□□□□□ -1.66
NCR1Q12200 TPO2YGR138C 1845 nt4.71□□□□□ -1.66
NCR1Q12200 HPC2YBR215W 1878 nt4.71□□□□□ -1.66
NCR1Q12200 CRT10YOL063C 2874 nt4.71□□□□□ -1.66
NCR1Q12200 RTC1YOL138C 4026 nt4.7□□□□□ -1.66
NCR1Q12200 SPT21YMR179W 2277 nt4.7□□□□□ -1.66
NCR1Q12200 YDR545C-AYDR545C-A 480 nt4.7□□□□□ -1.66
NCR1Q12200 RPL22AYLR061W 366 nt4.7□□□□□ -1.66
NCR1Q12200 YNL266WYNL266W 420 nt4.7□□□□□ -1.66
NCR1Q12200 MET4YNL103W 2019 nt4.7□□□□□ -1.66
NCR1Q12200 PRM15YMR278W 1869 nt4.69□□□□□ -1.66
NCR1Q12200 PMT4YJR143C 2289 nt4.69□□□□□ -1.66
NCR1Q12200 PIN4YBL051C 2007 nt4.69□□□□□ -1.66
NCR1Q12200 SOM1YEL059C-A 225 nt4.69□□□□□ -1.66
NCR1Q12200 FMP46YKR049C 402 nt4.69□□□□□ -1.66
NCR1Q12200 SSY1YDR160W 2559 nt4.69□□□□□ -1.66
NCR1Q12200 YEL043WYEL043W 2871 nt4.69□□□□□ -1.66
NCR1Q12200 ZIP2YGL249W 2115 nt4.69□□□□□ -1.66
NCR1Q12200 MUS81YDR386W 1899 nt4.69□□□□□ -1.66
NCR1Q12200 SAP155YFR040W 3009 nt4.68□□□□□ -1.66
NCR1Q12200 TMA17YDL110C 453 nt4.68□□□□□ -1.66
NCR1Q12200 tL(UAG)JtL(UAG)J 82 nt4.68□□□□□ -1.66
NCR1Q12200 tL(UAG)L1tL(UAG)L1 82 nt4.68□□□□□ -1.66
NCR1Q12200 tL(UAG)L2tL(UAG)L2 82 nt4.68□□□□□ -1.66
NCR1Q12200 REB1YBR049C 2433 nt4.68□□□□□ -1.66
NCR1Q12200 MEF2YJL102W 2460 nt4.67□□□□□ -1.66
NCR1Q12200 KIN2YLR096W 3444 nt4.67□□□□□ -1.66
NCR1Q12200 DBP7YKR024C 2229 nt4.67□□□□□ -1.66
NCR1Q12200 DIS3YOL021C 3006 nt4.67□□□□□ -1.66
NCR1Q12200 tL(UAA)QtL(UAA)Q 85 nt4.67□□□□□ -1.66
NCR1Q12200 ALY1YKR021W 2748 nt4.67□□□□□ -1.66
NCR1Q12200 BRE4YDL231C 3378 nt4.67□□□□□ -1.66
NCR1Q12200 SIN4YNL236W 2925 nt4.66□□□□□ -1.66
NCR1Q12200 TSA2YDR453C 591 nt4.66□□□□□ -1.66
NCR1Q12200 LCB5YLR260W 2064 nt4.66□□□□□ -1.66
NCR1Q12200 HOS4YIL112W 3252 nt4.66□□□□□ -1.66
NCR1Q12200 KRS1YDR037W 1776 nt4.65□□□□□ -1.66
NCR1Q12200 HEH2YDR458C 1992 nt4.65□□□□□ -1.66
NCR1Q12200 snR81snR81 201 nt4.65□□□□□ -1.67
NCR1Q12200 ASC1YMR116C 960 nt4.65□□□□□ -1.67
NCR1Q12200 RPL20BYOR312C 519 nt4.65□□□□□ -1.67
NCR1Q12200 YPR146CYPR146C 330 nt4.65□□□□□ -1.67
NCR1Q12200 snR191snR191 274 nt4.65□□□□□ -1.67
NCR1Q12200 GCR1YPL075W 2358 nt4.65□□□□□ -1.67
NCR1Q12200 KCC4YCL024W 3114 nt4.65□□□□□ -1.67
NCR1Q12200 TCP1YDR212W 1680 nt4.64□□□□□ -1.67
NCR1Q12200 snR79snR79 84 nt4.64□□□□□ -1.67
NCR1Q12200 BLM10YFL007W 6432 nt4.64□□□□□ -1.67
NCR1Q12200 ECM32YER176W 3366 nt4.64□□□□□ -1.67
NCR1Q12200 BCH2YKR027W 2298 nt4.63□□□□□ -1.67
NCR1Q12200 YER077CYER077C 2067 nt4.63□□□□□ -1.67
NCR1Q12200 YDL118WYDL118W 381 nt4.63□□□□□ -1.67
NCR1Q12200 YLR154W-AYLR154W-A 186 nt4.63□□□□□ -1.67
Retrieved 100 of 7,029 protein–RNA pairs in 71.4 ms