Protein–RNA interactions for Protein: P46098

HTR3A, 5-hydroxytryptamine receptor 3A, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR3AP46098 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
HTR3AP46098 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HTR3AP46098 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC18.84■□□□□ 0.61
HTR3AP46098 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC18.84■□□□□ 0.61
HTR3AP46098 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
HTR3AP46098 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HTR3AP46098 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
HTR3AP46098 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HTR3AP46098 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HTR3AP46098 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HTR3AP46098 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC18.84■□□□□ 0.61
HTR3AP46098 KRT18P5-201ENST00000436075 1291 ntBASIC18.84■□□□□ 0.61
HTR3AP46098 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
HTR3AP46098 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HTR3AP46098 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
HTR3AP46098 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC18.84■□□□□ 0.61
HTR3AP46098 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC18.84■□□□□ 0.61
HTR3AP46098 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC18.84■□□□□ 0.61
HTR3AP46098 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC18.84■□□□□ 0.61
HTR3AP46098 KRT18P61-201ENST00000585825 1298 ntBASIC18.84■□□□□ 0.61
HTR3AP46098 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC18.84■□□□□ 0.61
HTR3AP46098 TFG-210ENST00000620299 1289 ntTSL 5 BASIC18.84■□□□□ 0.61
HTR3AP46098 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
HTR3AP46098 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC18.84■□□□□ 0.61
HTR3AP46098 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HTR3AP46098 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC18.83■□□□□ 0.61
HTR3AP46098 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
HTR3AP46098 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC18.83■□□□□ 0.61
HTR3AP46098 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
HTR3AP46098 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC18.83■□□□□ 0.61
HTR3AP46098 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC18.83■□□□□ 0.61
HTR3AP46098 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
HTR3AP46098 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
HTR3AP46098 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
HTR3AP46098 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
HTR3AP46098 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
HTR3AP46098 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
HTR3AP46098 GXYLT1P2-201ENST00000433312 1230 ntBASIC18.83■□□□□ 0.6
HTR3AP46098 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC18.83■□□□□ 0.6
HTR3AP46098 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC18.83■□□□□ 0.6
HTR3AP46098 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC18.83■□□□□ 0.6
HTR3AP46098 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC18.83■□□□□ 0.6
HTR3AP46098 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC18.83■□□□□ 0.6
HTR3AP46098 AC243732.1-201ENST00000612648 864 ntBASIC18.83■□□□□ 0.6
HTR3AP46098 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.83■□□□□ 0.6
HTR3AP46098 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC18.83■□□□□ 0.6
HTR3AP46098 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC18.83■□□□□ 0.6
HTR3AP46098 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HTR3AP46098 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HTR3AP46098 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
HTR3AP46098 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HTR3AP46098 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC18.82■□□□□ 0.6
HTR3AP46098 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
HTR3AP46098 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
HTR3AP46098 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HTR3AP46098 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
HTR3AP46098 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
HTR3AP46098 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HTR3AP46098 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC18.82■□□□□ 0.6
HTR3AP46098 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
HTR3AP46098 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC18.82■□□□□ 0.6
HTR3AP46098 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC18.82■□□□□ 0.6
HTR3AP46098 RARRES2P11-201ENST00000635158 484 ntBASIC18.82■□□□□ 0.6
HTR3AP46098 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HTR3AP46098 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HTR3AP46098 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HTR3AP46098 AC121338.2-201ENST00000622535 1744 ntBASIC18.82■□□□□ 0.6
HTR3AP46098 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
HTR3AP46098 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
HTR3AP46098 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HTR3AP46098 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC18.81■□□□□ 0.6
HTR3AP46098 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HTR3AP46098 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HTR3AP46098 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HTR3AP46098 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
HTR3AP46098 AC087289.5-201ENST00000586076 3175 ntBASIC18.81■□□□□ 0.6
HTR3AP46098 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
HTR3AP46098 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
HTR3AP46098 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HTR3AP46098 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
HTR3AP46098 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
HTR3AP46098 UBE2DNL-204ENST00000602536 740 ntBASIC18.81■□□□□ 0.6
HTR3AP46098 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC18.81■□□□□ 0.6
HTR3AP46098 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC18.81■□□□□ 0.6
HTR3AP46098 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
HTR3AP46098 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HTR3AP46098 EXOC3-AS1-202ENST00000623673 1663 ntBASIC18.81■□□□□ 0.6
HTR3AP46098 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC18.81■□□□□ 0.6
HTR3AP46098 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HTR3AP46098 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC18.81■□□□□ 0.6
HTR3AP46098 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC18.81■□□□□ 0.6
HTR3AP46098 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HTR3AP46098 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HTR3AP46098 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC18.8■□□□□ 0.6
HTR3AP46098 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC18.8■□□□□ 0.6
HTR3AP46098 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HTR3AP46098 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HTR3AP46098 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HTR3AP46098 PARP1-202ENST00000366792 553 ntTSL 3 BASIC18.8■□□□□ 0.6
HTR3AP46098 DBI-210ENST00000542275 757 ntTSL 5 BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms