Protein–RNA interactions for Protein: P42695

NCAPD3, Condensin-2 complex subunit D3, humanhuman

Predictions only

Length 1,498 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCAPD3P42695 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC36.69■■■■□ 3.46
NCAPD3P42695 AC104076.2-201ENST00000448912 469 ntBASIC36.69■■■■□ 3.46
NCAPD3P42695 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC36.69■■■■□ 3.46
NCAPD3P42695 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC36.69■■■■□ 3.46
NCAPD3P42695 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC36.69■■■■□ 3.46
NCAPD3P42695 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC36.69■■■■□ 3.46
NCAPD3P42695 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC36.69■■■■□ 3.46
NCAPD3P42695 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC36.69■■■■□ 3.46
NCAPD3P42695 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC36.69■■■■□ 3.46
NCAPD3P42695 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC36.69■■■■□ 3.46
NCAPD3P42695 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC36.69■■■■□ 3.46
NCAPD3P42695 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC36.69■■■■□ 3.46
NCAPD3P42695 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC36.69■■■■□ 3.46
NCAPD3P42695 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC36.68■■■■□ 3.46
NCAPD3P42695 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC36.68■■■■□ 3.46
NCAPD3P42695 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC36.68■■■■□ 3.46
NCAPD3P42695 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC36.68■■■■□ 3.46
NCAPD3P42695 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC36.68■■■■□ 3.46
NCAPD3P42695 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC36.67■■■■□ 3.46
NCAPD3P42695 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC36.67■■■■□ 3.46
NCAPD3P42695 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC36.67■■■■□ 3.46
NCAPD3P42695 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC36.67■■■■□ 3.46
NCAPD3P42695 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC36.67■■■■□ 3.46
NCAPD3P42695 AL356652.1-201ENST00000615962 565 ntBASIC36.67■■■■□ 3.46
NCAPD3P42695 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC36.66■■■■□ 3.46
NCAPD3P42695 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC36.66■■■■□ 3.46
NCAPD3P42695 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC36.66■■■■□ 3.46
NCAPD3P42695 MIR1238-201ENST00000408483 83 ntBASIC36.66■■■■□ 3.46
NCAPD3P42695 PGM5P4-201ENST00000421970 445 ntBASIC36.66■■■■□ 3.46
NCAPD3P42695 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC36.66■■■■□ 3.46
NCAPD3P42695 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC36.66■■■■□ 3.46
NCAPD3P42695 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC36.66■■■■□ 3.46
NCAPD3P42695 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC36.66■■■■□ 3.46
NCAPD3P42695 USF2-205ENST00000594064 1179 ntTSL 2 BASIC36.66■■■■□ 3.46
NCAPD3P42695 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC36.66■■■■□ 3.46
NCAPD3P42695 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC36.65■■■■□ 3.46
NCAPD3P42695 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC36.65■■■■□ 3.46
NCAPD3P42695 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC36.65■■■■□ 3.46
NCAPD3P42695 AC006011.2-201ENST00000621313 1158 ntBASIC36.65■■■■□ 3.46
NCAPD3P42695 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC36.65■■■■□ 3.46
NCAPD3P42695 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC36.65■■■■□ 3.46
NCAPD3P42695 KRT18P22-201ENST00000402024 1347 ntBASIC36.65■■■■□ 3.46
NCAPD3P42695 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC36.64■■■■□ 3.46
NCAPD3P42695 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC36.64■■■■□ 3.46
NCAPD3P42695 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC36.64■■■■□ 3.46
NCAPD3P42695 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC36.64■■■■□ 3.46
NCAPD3P42695 AC116562.2-201ENST00000507042 360 ntBASIC36.64■■■■□ 3.46
NCAPD3P42695 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC36.64■■■■□ 3.46
NCAPD3P42695 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC36.64■■■■□ 3.46
NCAPD3P42695 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC36.64■■■■□ 3.46
NCAPD3P42695 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC36.64■■■■□ 3.46
NCAPD3P42695 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC36.63■■■■□ 3.46
NCAPD3P42695 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC36.63■■■■□ 3.45
NCAPD3P42695 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC36.63■■■■□ 3.45
NCAPD3P42695 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC36.63■■■■□ 3.45
NCAPD3P42695 AL390955.1-201ENST00000428694 934 ntBASIC36.63■■■■□ 3.45
NCAPD3P42695 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC36.63■■■■□ 3.45
NCAPD3P42695 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC36.63■■■■□ 3.45
NCAPD3P42695 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC36.63■■■■□ 3.45
NCAPD3P42695 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC36.63■■■■□ 3.45
NCAPD3P42695 NAPSB-206ENST00000562112 1266 ntBASIC36.63■■■■□ 3.45
NCAPD3P42695 WWOX-216ENST00000569818 525 ntBASIC36.63■■■■□ 3.45
NCAPD3P42695 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC36.63■■■■□ 3.45
NCAPD3P42695 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC36.63■■■■□ 3.45
NCAPD3P42695 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC36.63■■■■□ 3.45
NCAPD3P42695 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC36.63■■■■□ 3.45
NCAPD3P42695 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC36.63■■■■□ 3.45
NCAPD3P42695 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC36.63■■■■□ 3.45
NCAPD3P42695 AL137013.1-201ENST00000432946 1228 ntBASIC36.62■■■■□ 3.45
NCAPD3P42695 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC36.62■■■■□ 3.45
NCAPD3P42695 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC36.62■■■■□ 3.45
NCAPD3P42695 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC36.62■■■■□ 3.45
NCAPD3P42695 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC36.62■■■■□ 3.45
NCAPD3P42695 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC36.62■■■■□ 3.45
NCAPD3P42695 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC36.62■■■■□ 3.45
NCAPD3P42695 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC36.62■■■■□ 3.45
NCAPD3P42695 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC36.61■■■■□ 3.45
NCAPD3P42695 NBPF21P-201ENST00000425093 1451 ntBASIC36.61■■■■□ 3.45
NCAPD3P42695 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC36.61■■■■□ 3.45
NCAPD3P42695 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC36.61■■■■□ 3.45
NCAPD3P42695 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC36.61■■■■□ 3.45
NCAPD3P42695 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC36.61■■■■□ 3.45
NCAPD3P42695 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC36.61■■■■□ 3.45
NCAPD3P42695 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC36.61■■■■□ 3.45
NCAPD3P42695 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC36.61■■■■□ 3.45
NCAPD3P42695 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC36.61■■■■□ 3.45
NCAPD3P42695 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC36.61■■■■□ 3.45
NCAPD3P42695 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC36.61■■■■□ 3.45
NCAPD3P42695 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC36.6■■■■□ 3.45
NCAPD3P42695 AC010542.4-201ENST00000563151 1910 ntBASIC36.6■■■■□ 3.45
NCAPD3P42695 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC36.6■■■■□ 3.45
NCAPD3P42695 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC36.6■■■■□ 3.45
NCAPD3P42695 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC36.6■■■■□ 3.45
NCAPD3P42695 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC36.6■■■■□ 3.45
NCAPD3P42695 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC36.6■■■■□ 3.45
NCAPD3P42695 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC36.6■■■■□ 3.45
NCAPD3P42695 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC36.6■■■■□ 3.45
NCAPD3P42695 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC36.6■■■■□ 3.45
NCAPD3P42695 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC36.6■■■■□ 3.45
NCAPD3P42695 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC36.59■■■■□ 3.45
Retrieved 100 of 98,524 protein–RNA pairs in 12.6 ms