Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC18.25■□□□□ 0.51
TRAF3IP2O43734 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRAF3IP2O43734 AL137784.2-201ENST00000607332 1000 ntBASIC18.25■□□□□ 0.51
TRAF3IP2O43734 MIR2861-201ENST00000636310 90 ntBASIC18.25■□□□□ 0.51
TRAF3IP2O43734 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRAF3IP2O43734 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TRAF3IP2O43734 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
TRAF3IP2O43734 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC18.25■□□□□ 0.51
TRAF3IP2O43734 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC18.25■□□□□ 0.51
TRAF3IP2O43734 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRAF3IP2O43734 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRAF3IP2O43734 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRAF3IP2O43734 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC18.24■□□□□ 0.51
TRAF3IP2O43734 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC18.24■□□□□ 0.51
TRAF3IP2O43734 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRAF3IP2O43734 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRAF3IP2O43734 METTL26-203ENST00000397664 604 ntTSL 2 BASIC18.24■□□□□ 0.51
TRAF3IP2O43734 AC004911.1-201ENST00000416316 871 ntBASIC18.24■□□□□ 0.51
TRAF3IP2O43734 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC18.24■□□□□ 0.51
TRAF3IP2O43734 PBX1-209ENST00000485769 834 ntTSL 2 BASIC18.24■□□□□ 0.51
TRAF3IP2O43734 AL121603.2-201ENST00000557373 2117 ntBASIC18.24■□□□□ 0.51
TRAF3IP2O43734 MDK-213ENST00000617138 635 ntTSL 2 BASIC18.24■□□□□ 0.51
TRAF3IP2O43734 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC18.24■□□□□ 0.51
TRAF3IP2O43734 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC18.24■□□□□ 0.51
TRAF3IP2O43734 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC18.24■□□□□ 0.51
TRAF3IP2O43734 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC18.24■□□□□ 0.51
TRAF3IP2O43734 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
TRAF3IP2O43734 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TRAF3IP2O43734 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC18.23■□□□□ 0.51
TRAF3IP2O43734 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC18.23■□□□□ 0.51
TRAF3IP2O43734 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC18.23■□□□□ 0.51
TRAF3IP2O43734 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRAF3IP2O43734 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC18.23■□□□□ 0.51
TRAF3IP2O43734 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRAF3IP2O43734 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRAF3IP2O43734 AP005212.1-201ENST00000581547 1997 ntBASIC18.23■□□□□ 0.51
TRAF3IP2O43734 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC18.23■□□□□ 0.51
TRAF3IP2O43734 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC18.23■□□□□ 0.51
TRAF3IP2O43734 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC18.23■□□□□ 0.51
TRAF3IP2O43734 AC007322.1-201ENST00000426983 750 ntBASIC18.23■□□□□ 0.51
TRAF3IP2O43734 APTR-203ENST00000430801 583 ntTSL 5 BASIC18.23■□□□□ 0.51
TRAF3IP2O43734 CYP2T1P-201ENST00000432607 1285 ntBASIC18.23■□□□□ 0.51
TRAF3IP2O43734 AC080038.1-201ENST00000611274 1154 ntBASIC18.23■□□□□ 0.51
TRAF3IP2O43734 MAZ-216ENST00000616501 991 ntTSL 5 BASIC18.23■□□□□ 0.51
TRAF3IP2O43734 PARP1-210ENST00000629232 477 ntTSL 5 BASIC18.23■□□□□ 0.51
TRAF3IP2O43734 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRAF3IP2O43734 AC073314.1-201ENST00000568729 2216 ntBASIC18.23■□□□□ 0.51
TRAF3IP2O43734 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC18.23■□□□□ 0.51
TRAF3IP2O43734 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRAF3IP2O43734 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC18.23■□□□□ 0.51
TRAF3IP2O43734 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC18.23■□□□□ 0.51
TRAF3IP2O43734 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRAF3IP2O43734 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC18.23■□□□□ 0.51
TRAF3IP2O43734 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TRAF3IP2O43734 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRAF3IP2O43734 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRAF3IP2O43734 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRAF3IP2O43734 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
TRAF3IP2O43734 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRAF3IP2O43734 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TRAF3IP2O43734 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC18.22■□□□□ 0.51
TRAF3IP2O43734 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
TRAF3IP2O43734 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRAF3IP2O43734 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRAF3IP2O43734 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TRAF3IP2O43734 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRAF3IP2O43734 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
TRAF3IP2O43734 RARRES2P4-201ENST00000514074 484 ntBASIC18.22■□□□□ 0.51
TRAF3IP2O43734 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC18.22■□□□□ 0.51
TRAF3IP2O43734 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC18.22■□□□□ 0.51
TRAF3IP2O43734 AC092666.2-201ENST00000613287 246 ntBASIC18.22■□□□□ 0.51
TRAF3IP2O43734 AC073111.5-205ENST00000641717 521 ntBASIC18.22■□□□□ 0.51
TRAF3IP2O43734 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC18.22■□□□□ 0.51
TRAF3IP2O43734 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRAF3IP2O43734 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRAF3IP2O43734 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRAF3IP2O43734 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRAF3IP2O43734 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
TRAF3IP2O43734 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TRAF3IP2O43734 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC18.21■□□□□ 0.51
TRAF3IP2O43734 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRAF3IP2O43734 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TRAF3IP2O43734 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRAF3IP2O43734 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
TRAF3IP2O43734 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
TRAF3IP2O43734 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRAF3IP2O43734 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC18.21■□□□□ 0.51
TRAF3IP2O43734 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
TRAF3IP2O43734 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC18.21■□□□□ 0.51
TRAF3IP2O43734 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC18.21■□□□□ 0.51
TRAF3IP2O43734 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
TRAF3IP2O43734 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC18.21■□□□□ 0.51
TRAF3IP2O43734 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRAF3IP2O43734 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRAF3IP2O43734 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC18.21■□□□□ 0.51
TRAF3IP2O43734 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC18.2■□□□□ 0.5
TRAF3IP2O43734 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRAF3IP2O43734 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
TRAF3IP2O43734 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC18.2■□□□□ 0.5
TRAF3IP2O43734 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms