Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC23.07■■□□□ 1.28
DDX39AO00148 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
DDX39AO00148 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
DDX39AO00148 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
DDX39AO00148 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
DDX39AO00148 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
DDX39AO00148 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC23.07■■□□□ 1.28
DDX39AO00148 AC121338.2-201ENST00000622535 1744 ntBASIC23.07■■□□□ 1.28
DDX39AO00148 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC23.07■■□□□ 1.28
DDX39AO00148 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC23.07■■□□□ 1.28
DDX39AO00148 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
DDX39AO00148 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
DDX39AO00148 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
DDX39AO00148 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC23.06■■□□□ 1.28
DDX39AO00148 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
DDX39AO00148 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
DDX39AO00148 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC23.06■■□□□ 1.28
DDX39AO00148 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC23.06■■□□□ 1.28
DDX39AO00148 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
DDX39AO00148 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
DDX39AO00148 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC23.06■■□□□ 1.28
DDX39AO00148 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
DDX39AO00148 AC105020.6-201ENST00000621523 1217 ntBASIC23.06■■□□□ 1.28
DDX39AO00148 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
DDX39AO00148 AC007375.3-201ENST00000600936 2314 ntBASIC23.06■■□□□ 1.28
DDX39AO00148 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
DDX39AO00148 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
DDX39AO00148 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC23.06■■□□□ 1.28
DDX39AO00148 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC23.06■■□□□ 1.28
DDX39AO00148 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC23.06■■□□□ 1.28
DDX39AO00148 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC23.06■■□□□ 1.28
DDX39AO00148 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
DDX39AO00148 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
DDX39AO00148 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
DDX39AO00148 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
DDX39AO00148 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
DDX39AO00148 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
DDX39AO00148 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
DDX39AO00148 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC23.05■■□□□ 1.28
DDX39AO00148 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
DDX39AO00148 AC087633.2-202ENST00000565166 1439 ntBASIC23.05■■□□□ 1.28
DDX39AO00148 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
DDX39AO00148 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC23.05■■□□□ 1.28
DDX39AO00148 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
DDX39AO00148 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
DDX39AO00148 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
DDX39AO00148 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
DDX39AO00148 STAC-204ENST00000457375 1366 ntTSL 2 BASIC23.04■■□□□ 1.28
DDX39AO00148 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC23.04■■□□□ 1.28
DDX39AO00148 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC23.04■■□□□ 1.28
DDX39AO00148 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
DDX39AO00148 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
DDX39AO00148 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
DDX39AO00148 NME6-213ENST00000451657 871 ntTSL 2 BASIC23.04■■□□□ 1.28
DDX39AO00148 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
DDX39AO00148 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC23.04■■□□□ 1.28
DDX39AO00148 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
DDX39AO00148 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
DDX39AO00148 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
DDX39AO00148 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
DDX39AO00148 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
DDX39AO00148 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
DDX39AO00148 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
DDX39AO00148 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC23.03■■□□□ 1.28
DDX39AO00148 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
DDX39AO00148 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC23.03■■□□□ 1.28
DDX39AO00148 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC23.03■■□□□ 1.28
DDX39AO00148 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
DDX39AO00148 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC23.03■■□□□ 1.28
DDX39AO00148 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
DDX39AO00148 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC23.03■■□□□ 1.28
DDX39AO00148 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC23.03■■□□□ 1.28
DDX39AO00148 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
DDX39AO00148 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC23.03■■□□□ 1.28
DDX39AO00148 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
DDX39AO00148 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC23.03■■□□□ 1.28
DDX39AO00148 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
DDX39AO00148 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC23.02■■□□□ 1.28
DDX39AO00148 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
DDX39AO00148 PLK5-205ENST00000642079 1969 ntBASIC23.02■■□□□ 1.28
DDX39AO00148 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
DDX39AO00148 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
DDX39AO00148 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
DDX39AO00148 GATS-209ENST00000454084 1030 ntTSL 3 BASIC23.02■■□□□ 1.28
DDX39AO00148 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC23.02■■□□□ 1.28
DDX39AO00148 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC23.02■■□□□ 1.28
DDX39AO00148 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
DDX39AO00148 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC23.02■■□□□ 1.28
DDX39AO00148 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
DDX39AO00148 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.27
DDX39AO00148 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC23.01■■□□□ 1.27
DDX39AO00148 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
DDX39AO00148 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
DDX39AO00148 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
DDX39AO00148 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
DDX39AO00148 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
DDX39AO00148 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
DDX39AO00148 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
DDX39AO00148 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC23.01■■□□□ 1.27
DDX39AO00148 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC23.01■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms