Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRAV18A0A075B6X5 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC17.57■□□□□ 0.4
TRAV18A0A075B6X5 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRAV18A0A075B6X5 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TRAV18A0A075B6X5 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRAV18A0A075B6X5 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRAV18A0A075B6X5 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
TRAV18A0A075B6X5 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TRAV18A0A075B6X5 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRAV18A0A075B6X5 QDPR-206ENST00000508623 601 ntTSL 3 BASIC17.56■□□□□ 0.4
TRAV18A0A075B6X5 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRAV18A0A075B6X5 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC17.56■□□□□ 0.4
TRAV18A0A075B6X5 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC17.56■□□□□ 0.4
TRAV18A0A075B6X5 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
TRAV18A0A075B6X5 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC17.56■□□□□ 0.4
TRAV18A0A075B6X5 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRAV18A0A075B6X5 AC018445.3-201ENST00000624177 1945 ntBASIC17.56■□□□□ 0.4
TRAV18A0A075B6X5 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
TRAV18A0A075B6X5 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRAV18A0A075B6X5 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
TRAV18A0A075B6X5 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRAV18A0A075B6X5 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRAV18A0A075B6X5 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
TRAV18A0A075B6X5 AC009237.3-201ENST00000393279 1427 ntBASIC17.55■□□□□ 0.4
TRAV18A0A075B6X5 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRAV18A0A075B6X5 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TRAV18A0A075B6X5 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRAV18A0A075B6X5 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRAV18A0A075B6X5 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRAV18A0A075B6X5 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRAV18A0A075B6X5 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC17.55■□□□□ 0.4
TRAV18A0A075B6X5 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
TRAV18A0A075B6X5 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRAV18A0A075B6X5 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRAV18A0A075B6X5 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRAV18A0A075B6X5 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC17.55■□□□□ 0.4
TRAV18A0A075B6X5 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRAV18A0A075B6X5 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC17.55■□□□□ 0.4
TRAV18A0A075B6X5 DUX4L19-201ENST00000557448 1267 ntBASIC17.55■□□□□ 0.4
TRAV18A0A075B6X5 AC011298.3-201ENST00000615796 283 ntBASIC17.55■□□□□ 0.4
TRAV18A0A075B6X5 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
TRAV18A0A075B6X5 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC17.55■□□□□ 0.4
TRAV18A0A075B6X5 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRAV18A0A075B6X5 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
TRAV18A0A075B6X5 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
TRAV18A0A075B6X5 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
TRAV18A0A075B6X5 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRAV18A0A075B6X5 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
TRAV18A0A075B6X5 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
TRAV18A0A075B6X5 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRAV18A0A075B6X5 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC17.55■□□□□ 0.4
TRAV18A0A075B6X5 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRAV18A0A075B6X5 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
TRAV18A0A075B6X5 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRAV18A0A075B6X5 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
TRAV18A0A075B6X5 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRAV18A0A075B6X5 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRAV18A0A075B6X5 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRAV18A0A075B6X5 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRAV18A0A075B6X5 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
TRAV18A0A075B6X5 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC17.54■□□□□ 0.4
TRAV18A0A075B6X5 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRAV18A0A075B6X5 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRAV18A0A075B6X5 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
TRAV18A0A075B6X5 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC17.54■□□□□ 0.4
TRAV18A0A075B6X5 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TRAV18A0A075B6X5 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRAV18A0A075B6X5 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRAV18A0A075B6X5 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TRAV18A0A075B6X5 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC17.54■□□□□ 0.4
TRAV18A0A075B6X5 AL512631.2-201ENST00000604634 923 ntBASIC17.54■□□□□ 0.4
TRAV18A0A075B6X5 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC17.54■□□□□ 0.4
TRAV18A0A075B6X5 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRAV18A0A075B6X5 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TRAV18A0A075B6X5 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC17.54■□□□□ 0.4
TRAV18A0A075B6X5 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC17.54■□□□□ 0.4
TRAV18A0A075B6X5 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TRAV18A0A075B6X5 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC17.54■□□□□ 0.4
TRAV18A0A075B6X5 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC17.54■□□□□ 0.4
TRAV18A0A075B6X5 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRAV18A0A075B6X5 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC17.54■□□□□ 0.4
TRAV18A0A075B6X5 STAC-204ENST00000457375 1366 ntTSL 2 BASIC17.53■□□□□ 0.4
TRAV18A0A075B6X5 AC055733.4-201ENST00000638462 1354 ntBASIC17.53■□□□□ 0.4
TRAV18A0A075B6X5 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRAV18A0A075B6X5 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRAV18A0A075B6X5 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TRAV18A0A075B6X5 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC17.53■□□□□ 0.4
TRAV18A0A075B6X5 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TRAV18A0A075B6X5 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TRAV18A0A075B6X5 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TRAV18A0A075B6X5 OR2A1-AS1-204ENST00000470435 602 ntBASIC17.53■□□□□ 0.4
TRAV18A0A075B6X5 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
TRAV18A0A075B6X5 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC17.53■□□□□ 0.4
TRAV18A0A075B6X5 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
TRAV18A0A075B6X5 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRAV18A0A075B6X5 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRAV18A0A075B6X5 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC17.52■□□□□ 0.4
TRAV18A0A075B6X5 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRAV18A0A075B6X5 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TRAV18A0A075B6X5 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms