Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 NBPF4-201ENST00000415641 2485 ntAPPRIS P2 TSL 2 BASIC9.57□□□□□ -0.88
LMO3Q8TAP4 SERPINB2-201ENST00000299502 1913 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
LMO3Q8TAP4 PRKAR1A-211ENST00000586397 1940 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
LMO3Q8TAP4 TP53BP1-210ENST00000450115 6179 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
LMO3Q8TAP4 LAIR2-202ENST00000351841 538 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
LMO3Q8TAP4 Metazoa_SRP.7-201ENST00000392674 281 ntBASIC9.57□□□□□ -0.88
LMO3Q8TAP4 EPSTI1-203ENST00000398762 957 ntAPPRIS ALT2 TSL 5 BASIC9.57□□□□□ -0.88
LMO3Q8TAP4 MAPK6PS6-201ENST00000420752 1053 ntBASIC9.57□□□□□ -0.88
LMO3Q8TAP4 AL606490.3-201ENST00000422410 270 ntTSL 5 BASIC9.57□□□□□ -0.88
LMO3Q8TAP4 AP000459.1-201ENST00000433101 861 ntTSL 3 BASIC9.57□□□□□ -0.88
LMO3Q8TAP4 SNX18P2-201ENST00000438540 808 ntBASIC9.57□□□□□ -0.88
LMO3Q8TAP4 AC011193.1-202ENST00000441287 323 ntTSL 3 BASIC9.57□□□□□ -0.88
LMO3Q8TAP4 HCG25-220ENST00000450514 759 ntTSL 3 BASIC9.57□□□□□ -0.88
LMO3Q8TAP4 FTLP18-201ENST00000453860 523 ntBASIC9.57□□□□□ -0.88
LMO3Q8TAP4 NPAP1P2-201ENST00000456716 1234 ntBASIC9.57□□□□□ -0.88
LMO3Q8TAP4 OR2A7-201ENST00000493325 1116 ntAPPRIS P1 BASIC9.57□□□□□ -0.88
LMO3Q8TAP4 AC026787.1-201ENST00000504182 420 ntTSL 5 BASIC9.57□□□□□ -0.88
LMO3Q8TAP4 DCAF13-203ENST00000519682 837 ntTSL 2 BASIC9.57□□□□□ -0.88
LMO3Q8TAP4 OR1D4-201ENST00000525719 939 ntBASIC9.57□□□□□ -0.88
LMO3Q8TAP4 OR4B2P-201ENST00000527724 882 ntBASIC9.57□□□□□ -0.88
LMO3Q8TAP4 LINC01499-202ENST00000529282 563 ntTSL 4 BASIC9.57□□□□□ -0.88
LMO3Q8TAP4 LINC01499-203ENST00000530379 555 ntTSL 4 BASIC9.57□□□□□ -0.88
LMO3Q8TAP4 AC090115.1-201ENST00000548257 562 ntTSL 4 BASIC9.57□□□□□ -0.88
LMO3Q8TAP4 AL049833.1-201ENST00000557745 840 ntTSL 3 BASIC9.57□□□□□ -0.88
LMO3Q8TAP4 MKRN2OS-203ENST00000564146 985 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
LMO3Q8TAP4 OR1D5-201ENST00000575751 939 ntAPPRIS P1 BASIC9.57□□□□□ -0.88
LMO3Q8TAP4 E2F3P1-201ENST00000589887 1230 ntBASIC9.57□□□□□ -0.88
LMO3Q8TAP4 G6PC-204ENST00000592383 987 ntTSL 2 BASIC9.57□□□□□ -0.88
LMO3Q8TAP4 AC010320.3-201ENST00000594865 447 ntTSL 3 BASIC9.57□□□□□ -0.88
LMO3Q8TAP4 AC073869.3-201ENST00000609270 580 ntTSL 5 BASIC9.57□□□□□ -0.88
LMO3Q8TAP4 U3.50-201ENST00000611947 228 ntBASIC9.57□□□□□ -0.88
LMO3Q8TAP4 AC009122.1-201ENST00000640559 1218 ntAPPRIS P1 TSL 3 BASIC9.57□□□□□ -0.88
LMO3Q8TAP4 ATF7-201ENST00000420353 6680 ntAPPRIS P2 TSL 1 (best) BASIC9.57□□□□□ -0.88
LMO3Q8TAP4 AC124804.1-202ENST00000583712 4315 ntTSL 5 BASIC9.57□□□□□ -0.88
LMO3Q8TAP4 FAM83F-201ENST00000333407 15561 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
LMO3Q8TAP4 USP17L21-202ENST00000621388 1677 ntAPPRIS ALT2 TSL 5 BASIC9.57□□□□□ -0.88
LMO3Q8TAP4 CACNB2-209ENST00000396576 4464 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
LMO3Q8TAP4 TTC23-203ENST00000394132 3849 ntAPPRIS P2 TSL 1 (best) BASIC9.57□□□□□ -0.88
LMO3Q8TAP4 LRRC27-204ENST00000368614 6374 ntAPPRIS P3 TSL 1 (best) BASIC9.57□□□□□ -0.88
LMO3Q8TAP4 TRAF3IP2-207ENST00000368761 5128 ntAPPRIS P3 TSL 1 (best) BASIC9.57□□□□□ -0.88
LMO3Q8TAP4 PSD4-205ENST00000441564 11234 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
LMO3Q8TAP4 ZNF317-202ENST00000360385 3955 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
LMO3Q8TAP4 ATP5A1P3-201ENST00000573189 1507 ntBASIC9.56□□□□□ -0.88
LMO3Q8TAP4 NEPRO-202ENST00000383675 4672 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
LMO3Q8TAP4 MUC6-201ENST00000421673 8006 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
LMO3Q8TAP4 SOCS4-202ENST00000395472 6779 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
LMO3Q8TAP4 C16orf62-205ENST00000513947 2501 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
LMO3Q8TAP4 ENY2-211ENST00000521688 2922 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
LMO3Q8TAP4 LPL-201ENST00000311322 3846 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
LMO3Q8TAP4 SYK-202ENST00000375747 4908 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
LMO3Q8TAP4 TAF1L-201ENST00000242310 6216 ntAPPRIS P1 BASIC9.56□□□□□ -0.88
LMO3Q8TAP4 ZBTB39-201ENST00000300101 6170 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
LMO3Q8TAP4 ZNF185-202ENST00000318529 3878 ntAPPRIS ALT2 TSL 2 BASIC9.56□□□□□ -0.88
LMO3Q8TAP4 LINC00486-201ENST00000414054 1794 ntTSL 4 BASIC9.56□□□□□ -0.88
LMO3Q8TAP4 DBIL5P2-202ENST00000491724 1692 ntBASIC9.56□□□□□ -0.88
LMO3Q8TAP4 BTG4-201ENST00000356018 1018 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
LMO3Q8TAP4 SNORD3G-201ENST00000362796 215 ntBASIC9.56□□□□□ -0.88
LMO3Q8TAP4 ZDHHC11B-201ENST00000382776 1116 ntAPPRIS ALT2 TSL 5 BASIC9.56□□□□□ -0.88
LMO3Q8TAP4 RNU1-28P-201ENST00000383861 164 ntBASIC9.56□□□□□ -0.88
LMO3Q8TAP4 RNU1-27P-201ENST00000383869 164 ntBASIC9.56□□□□□ -0.88
LMO3Q8TAP4 RNU1-1-201ENST00000383925 164 ntBASIC9.56□□□□□ -0.88
LMO3Q8TAP4 RNVU1-18-201ENST00000384010 164 ntBASIC9.56□□□□□ -0.88
LMO3Q8TAP4 RNU1-2-201ENST00000384278 164 ntBASIC9.56□□□□□ -0.88
LMO3Q8TAP4 RNU1-4-201ENST00000384659 164 ntBASIC9.56□□□□□ -0.88
LMO3Q8TAP4 RNU1-3-201ENST00000384782 164 ntBASIC9.56□□□□□ -0.88
LMO3Q8TAP4 MIR197-201ENST00000384976 75 ntBASIC9.56□□□□□ -0.88
LMO3Q8TAP4 OR6B1-201ENST00000408922 1055 ntAPPRIS P1 BASIC9.56□□□□□ -0.88
LMO3Q8TAP4 RPSAP21-201ENST00000414293 885 ntBASIC9.56□□□□□ -0.88
LMO3Q8TAP4 KIF9-203ENST00000425452 640 ntTSL 3 BASIC9.56□□□□□ -0.88
LMO3Q8TAP4 ARAFP3-201ENST00000454154 490 ntBASIC9.56□□□□□ -0.88
LMO3Q8TAP4 RN7SL318P-201ENST00000471955 297 ntBASIC9.56□□□□□ -0.88
LMO3Q8TAP4 AL390726.2-201ENST00000504791 343 ntBASIC9.56□□□□□ -0.88
LMO3Q8TAP4 AC098827.1-201ENST00000514630 667 ntBASIC9.56□□□□□ -0.88
LMO3Q8TAP4 IGHVIII-51-1-201ENST00000519403 302 ntBASIC9.56□□□□□ -0.88
LMO3Q8TAP4 AC131902.1-201ENST00000521558 594 ntTSL 3 BASIC9.56□□□□□ -0.88
LMO3Q8TAP4 FDPSP4-201ENST00000534629 1049 ntBASIC9.56□□□□□ -0.88
LMO3Q8TAP4 AC069208.1-206ENST00000538905 832 ntTSL 4 BASIC9.56□□□□□ -0.88
LMO3Q8TAP4 AC089998.3-201ENST00000549715 493 ntBASIC9.56□□□□□ -0.88
LMO3Q8TAP4 AL049833.2-201ENST00000557211 750 ntTSL 3 BASIC9.56□□□□□ -0.88
LMO3Q8TAP4 AC003965.1-201ENST00000575693 667 ntTSL 3 BASIC9.56□□□□□ -0.88
LMO3Q8TAP4 AC024267.6-202ENST00000579187 1103 ntBASIC9.56□□□□□ -0.88
LMO3Q8TAP4 SSH2-209ENST00000579954 428 ntTSL 3 BASIC9.56□□□□□ -0.88
LMO3Q8TAP4 U1.40-201ENST00000610976 164 ntBASIC9.56□□□□□ -0.88
LMO3Q8TAP4 AL669942.1-201ENST00000611307 713 ntTSL 5 BASIC9.56□□□□□ -0.88
LMO3Q8TAP4 PCDH18-206ENST00000611581 819 ntTSL 4 BASIC9.56□□□□□ -0.88
LMO3Q8TAP4 U1.27-201ENST00000615842 164 ntBASIC9.56□□□□□ -0.88
LMO3Q8TAP4 AC092611.3-201ENST00000624858 718 ntBASIC9.56□□□□□ -0.88
LMO3Q8TAP4 PKP4-218ENST00000629219 162 ntTSL 5 BASIC9.56□□□□□ -0.88
LMO3Q8TAP4 TMEM182-211ENST00000640575 1155 ntTSL 5 BASIC9.56□□□□□ -0.88
LMO3Q8TAP4 PRCP-202ENST00000393399 2120 ntTSL 2 BASIC9.56□□□□□ -0.88
LMO3Q8TAP4 OPCML-207ENST00000541867 6277 ntTSL 5 BASIC9.56□□□□□ -0.88
LMO3Q8TAP4 OPCML-208ENST00000612177 6250 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
LMO3Q8TAP4 AL845331.3-201ENST00000562821 2028 ntTSL 2 BASIC9.56□□□□□ -0.88
LMO3Q8TAP4 UTP15-202ENST00000508491 1828 ntTSL 2 BASIC9.56□□□□□ -0.88
LMO3Q8TAP4 XIST-211ENST00000635841 1734 ntTSL 5 BASIC9.56□□□□□ -0.88
LMO3Q8TAP4 STAT4-201ENST00000358470 2769 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
LMO3Q8TAP4 AC091173.1-201ENST00000505627 2750 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
LMO3Q8TAP4 TNIK-211ENST00000475336 3807 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
LMO3Q8TAP4 ZNF778-201ENST00000306502 2386 ntTSL 2 BASIC9.56□□□□□ -0.88
LMO3Q8TAP4 GSDMB-204ENST00000394179 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Retrieved 100 of 98,524 protein–RNA pairs in 61.3 ms