Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC19.47■□□□□ 0.71
LRCH1Q9Y2L9 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
LRCH1Q9Y2L9 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LRCH1Q9Y2L9 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LRCH1Q9Y2L9 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
LRCH1Q9Y2L9 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
LRCH1Q9Y2L9 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
LRCH1Q9Y2L9 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
LRCH1Q9Y2L9 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
LRCH1Q9Y2L9 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
LRCH1Q9Y2L9 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
LRCH1Q9Y2L9 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC19.46■□□□□ 0.71
LRCH1Q9Y2L9 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
LRCH1Q9Y2L9 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
LRCH1Q9Y2L9 ASB1-202ENST00000409297 878 ntTSL 5 BASIC19.46■□□□□ 0.71
LRCH1Q9Y2L9 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
LRCH1Q9Y2L9 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC19.46■□□□□ 0.71
LRCH1Q9Y2L9 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC19.46■□□□□ 0.71
LRCH1Q9Y2L9 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC19.46■□□□□ 0.71
LRCH1Q9Y2L9 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
LRCH1Q9Y2L9 AC007613.1-201ENST00000572811 2597 ntBASIC19.46■□□□□ 0.71
LRCH1Q9Y2L9 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LRCH1Q9Y2L9 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC19.46■□□□□ 0.71
LRCH1Q9Y2L9 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LRCH1Q9Y2L9 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
LRCH1Q9Y2L9 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC19.46■□□□□ 0.71
LRCH1Q9Y2L9 AC005332.8-201ENST00000622750 2735 ntBASIC19.45■□□□□ 0.7
LRCH1Q9Y2L9 ADK-206ENST00000541550 2222 ntTSL 2 BASIC19.45■□□□□ 0.7
LRCH1Q9Y2L9 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LRCH1Q9Y2L9 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
LRCH1Q9Y2L9 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC19.45■□□□□ 0.7
LRCH1Q9Y2L9 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
LRCH1Q9Y2L9 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LRCH1Q9Y2L9 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC19.45■□□□□ 0.7
LRCH1Q9Y2L9 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
LRCH1Q9Y2L9 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC19.45■□□□□ 0.7
LRCH1Q9Y2L9 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC19.45■□□□□ 0.7
LRCH1Q9Y2L9 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
LRCH1Q9Y2L9 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
LRCH1Q9Y2L9 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC19.45■□□□□ 0.7
LRCH1Q9Y2L9 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
LRCH1Q9Y2L9 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LRCH1Q9Y2L9 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LRCH1Q9Y2L9 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LRCH1Q9Y2L9 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
LRCH1Q9Y2L9 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LRCH1Q9Y2L9 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC19.44■□□□□ 0.7
LRCH1Q9Y2L9 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC19.44■□□□□ 0.7
LRCH1Q9Y2L9 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LRCH1Q9Y2L9 LTB4R2-202ENST00000528054 3092 ntBASIC19.44■□□□□ 0.7
LRCH1Q9Y2L9 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LRCH1Q9Y2L9 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
LRCH1Q9Y2L9 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC19.44■□□□□ 0.7
LRCH1Q9Y2L9 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
LRCH1Q9Y2L9 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC19.44■□□□□ 0.7
LRCH1Q9Y2L9 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
LRCH1Q9Y2L9 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC19.44■□□□□ 0.7
LRCH1Q9Y2L9 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC19.44■□□□□ 0.7
LRCH1Q9Y2L9 CREM-229ENST00000474362 1030 ntTSL 2 BASIC19.44■□□□□ 0.7
LRCH1Q9Y2L9 AC079089.2-201ENST00000531211 1277 ntBASIC19.44■□□□□ 0.7
LRCH1Q9Y2L9 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
LRCH1Q9Y2L9 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LRCH1Q9Y2L9 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LRCH1Q9Y2L9 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LRCH1Q9Y2L9 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC19.44■□□□□ 0.7
LRCH1Q9Y2L9 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.44■□□□□ 0.7
LRCH1Q9Y2L9 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
LRCH1Q9Y2L9 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LRCH1Q9Y2L9 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LRCH1Q9Y2L9 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC19.44■□□□□ 0.7
LRCH1Q9Y2L9 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC19.43■□□□□ 0.7
LRCH1Q9Y2L9 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
LRCH1Q9Y2L9 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC19.43■□□□□ 0.7
LRCH1Q9Y2L9 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LRCH1Q9Y2L9 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LRCH1Q9Y2L9 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
LRCH1Q9Y2L9 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
LRCH1Q9Y2L9 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LRCH1Q9Y2L9 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LRCH1Q9Y2L9 AC020916.1-201ENST00000587762 1774 ntBASIC19.43■□□□□ 0.7
LRCH1Q9Y2L9 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC19.43■□□□□ 0.7
LRCH1Q9Y2L9 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC19.43■□□□□ 0.7
LRCH1Q9Y2L9 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC19.43■□□□□ 0.7
LRCH1Q9Y2L9 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
LRCH1Q9Y2L9 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
LRCH1Q9Y2L9 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
LRCH1Q9Y2L9 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC19.43■□□□□ 0.7
LRCH1Q9Y2L9 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC19.43■□□□□ 0.7
LRCH1Q9Y2L9 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC19.43■□□□□ 0.7
LRCH1Q9Y2L9 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
LRCH1Q9Y2L9 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
LRCH1Q9Y2L9 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LRCH1Q9Y2L9 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
LRCH1Q9Y2L9 OR7E47P-201ENST00000546390 1422 ntBASIC19.42■□□□□ 0.7
LRCH1Q9Y2L9 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LRCH1Q9Y2L9 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC19.42■□□□□ 0.7
LRCH1Q9Y2L9 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC19.42■□□□□ 0.7
LRCH1Q9Y2L9 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC19.42■□□□□ 0.7
LRCH1Q9Y2L9 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
LRCH1Q9Y2L9 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms