Protein–RNA interactions for Protein: Q9NX63

CHCHD3, MICOS complex subunit MIC19, humanhuman

Known RBP Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3Q9NX63 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CHCHD3Q9NX63 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC18.97■□□□□ 0.63
CHCHD3Q9NX63 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CHCHD3Q9NX63 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC18.97■□□□□ 0.63
CHCHD3Q9NX63 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
CHCHD3Q9NX63 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC18.97■□□□□ 0.63
CHCHD3Q9NX63 AL356309.3-201ENST00000624132 1934 ntBASIC18.97■□□□□ 0.63
CHCHD3Q9NX63 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
CHCHD3Q9NX63 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
CHCHD3Q9NX63 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CHCHD3Q9NX63 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CHCHD3Q9NX63 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CHCHD3Q9NX63 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CHCHD3Q9NX63 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CHCHD3Q9NX63 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CHCHD3Q9NX63 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CHCHD3Q9NX63 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CHCHD3Q9NX63 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CHCHD3Q9NX63 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CHCHD3Q9NX63 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
CHCHD3Q9NX63 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CHCHD3Q9NX63 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CHCHD3Q9NX63 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CHCHD3Q9NX63 AL139384.1-201ENST00000612143 3047 ntBASIC18.96■□□□□ 0.63
CHCHD3Q9NX63 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CHCHD3Q9NX63 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC18.96■□□□□ 0.63
CHCHD3Q9NX63 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC18.96■□□□□ 0.63
CHCHD3Q9NX63 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC18.96■□□□□ 0.63
CHCHD3Q9NX63 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
CHCHD3Q9NX63 AC092028.1-203ENST00000608262 953 ntBASIC18.96■□□□□ 0.63
CHCHD3Q9NX63 AC012354.3-201ENST00000623734 483 ntBASIC18.96■□□□□ 0.63
CHCHD3Q9NX63 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC18.96■□□□□ 0.63
CHCHD3Q9NX63 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CHCHD3Q9NX63 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CHCHD3Q9NX63 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
CHCHD3Q9NX63 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CHCHD3Q9NX63 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CHCHD3Q9NX63 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CHCHD3Q9NX63 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC18.96■□□□□ 0.63
CHCHD3Q9NX63 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CHCHD3Q9NX63 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
CHCHD3Q9NX63 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CHCHD3Q9NX63 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CHCHD3Q9NX63 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC18.95■□□□□ 0.62
CHCHD3Q9NX63 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHCHD3Q9NX63 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC18.95■□□□□ 0.62
CHCHD3Q9NX63 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHCHD3Q9NX63 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHCHD3Q9NX63 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC18.95■□□□□ 0.62
CHCHD3Q9NX63 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
CHCHD3Q9NX63 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHCHD3Q9NX63 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC18.95■□□□□ 0.62
CHCHD3Q9NX63 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC18.95■□□□□ 0.62
CHCHD3Q9NX63 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
CHCHD3Q9NX63 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC18.95■□□□□ 0.62
CHCHD3Q9NX63 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CHCHD3Q9NX63 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHCHD3Q9NX63 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC18.95■□□□□ 0.62
CHCHD3Q9NX63 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHCHD3Q9NX63 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHCHD3Q9NX63 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHCHD3Q9NX63 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC18.95■□□□□ 0.62
CHCHD3Q9NX63 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC18.95■□□□□ 0.62
CHCHD3Q9NX63 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC18.95■□□□□ 0.62
CHCHD3Q9NX63 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CHCHD3Q9NX63 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC18.95■□□□□ 0.62
CHCHD3Q9NX63 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CHCHD3Q9NX63 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC18.95■□□□□ 0.62
CHCHD3Q9NX63 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC18.95■□□□□ 0.62
CHCHD3Q9NX63 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC18.95■□□□□ 0.62
CHCHD3Q9NX63 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
CHCHD3Q9NX63 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CHCHD3Q9NX63 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC18.95■□□□□ 0.62
CHCHD3Q9NX63 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHCHD3Q9NX63 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
CHCHD3Q9NX63 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC18.95■□□□□ 0.62
CHCHD3Q9NX63 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC18.95■□□□□ 0.62
CHCHD3Q9NX63 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CHCHD3Q9NX63 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHCHD3Q9NX63 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
CHCHD3Q9NX63 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHCHD3Q9NX63 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CHCHD3Q9NX63 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
CHCHD3Q9NX63 GABARAPL3-202ENST00000624044 1851 ntBASIC18.94■□□□□ 0.62
CHCHD3Q9NX63 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CHCHD3Q9NX63 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC18.94■□□□□ 0.62
CHCHD3Q9NX63 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CHCHD3Q9NX63 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CHCHD3Q9NX63 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CHCHD3Q9NX63 CD72-202ENST00000378430 585 ntTSL 3 BASIC18.94■□□□□ 0.62
CHCHD3Q9NX63 TFPT-201ENST00000391757 774 ntTSL 5 BASIC18.94■□□□□ 0.62
CHCHD3Q9NX63 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CHCHD3Q9NX63 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CHCHD3Q9NX63 AL034346.1-201ENST00000568244 1277 ntBASIC18.94■□□□□ 0.62
CHCHD3Q9NX63 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
CHCHD3Q9NX63 AC241377.3-202ENST00000626088 1088 ntBASIC18.94■□□□□ 0.62
CHCHD3Q9NX63 AC241585.3-202ENST00000628937 1088 ntBASIC18.94■□□□□ 0.62
CHCHD3Q9NX63 AC245100.8-202ENST00000629247 1058 ntBASIC18.94■□□□□ 0.62
CHCHD3Q9NX63 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CHCHD3Q9NX63 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms