Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
TM9SF3Q9HD45 FAM99A-202ENST00000538190 1989 ntBASIC20.53■□□□□ 0.88
TM9SF3Q9HD45 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC20.53■□□□□ 0.88
TM9SF3Q9HD45 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TM9SF3Q9HD45 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.52■□□□□ 0.88
TM9SF3Q9HD45 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TM9SF3Q9HD45 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC20.52■□□□□ 0.88
TM9SF3Q9HD45 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TM9SF3Q9HD45 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC20.52■□□□□ 0.88
TM9SF3Q9HD45 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC20.52■□□□□ 0.88
TM9SF3Q9HD45 PTPA-214ENST00000423100 988 ntTSL 2 BASIC20.52■□□□□ 0.88
TM9SF3Q9HD45 AC007322.3-201ENST00000426526 701 ntBASIC20.52■□□□□ 0.88
TM9SF3Q9HD45 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC20.52■□□□□ 0.88
TM9SF3Q9HD45 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TM9SF3Q9HD45 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC20.52■□□□□ 0.88
TM9SF3Q9HD45 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TM9SF3Q9HD45 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TM9SF3Q9HD45 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
TM9SF3Q9HD45 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.87
TM9SF3Q9HD45 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC20.52■□□□□ 0.87
TM9SF3Q9HD45 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC20.51■□□□□ 0.87
TM9SF3Q9HD45 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
TM9SF3Q9HD45 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
TM9SF3Q9HD45 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TM9SF3Q9HD45 STX5-203ENST00000394690 1568 ntTSL 5 BASIC20.51■□□□□ 0.87
TM9SF3Q9HD45 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.51■□□□□ 0.87
TM9SF3Q9HD45 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TM9SF3Q9HD45 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
TM9SF3Q9HD45 GCK-205ENST00000437084 1385 ntTSL 5 BASIC20.51■□□□□ 0.87
TM9SF3Q9HD45 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TM9SF3Q9HD45 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TM9SF3Q9HD45 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TM9SF3Q9HD45 PEX7-202ENST00000367756 680 ntTSL 3 BASIC20.51■□□□□ 0.87
TM9SF3Q9HD45 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.51■□□□□ 0.87
TM9SF3Q9HD45 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TM9SF3Q9HD45 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC20.51■□□□□ 0.87
TM9SF3Q9HD45 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
TM9SF3Q9HD45 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC20.51■□□□□ 0.87
TM9SF3Q9HD45 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
TM9SF3Q9HD45 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
TM9SF3Q9HD45 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TM9SF3Q9HD45 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
TM9SF3Q9HD45 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TM9SF3Q9HD45 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TM9SF3Q9HD45 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC20.5■□□□□ 0.87
TM9SF3Q9HD45 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC20.5■□□□□ 0.87
TM9SF3Q9HD45 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
TM9SF3Q9HD45 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
TM9SF3Q9HD45 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TM9SF3Q9HD45 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC20.5■□□□□ 0.87
TM9SF3Q9HD45 PNMA6B-201ENST00000538162 1200 ntBASIC20.5■□□□□ 0.87
TM9SF3Q9HD45 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC20.5■□□□□ 0.87
TM9SF3Q9HD45 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC20.5■□□□□ 0.87
TM9SF3Q9HD45 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TM9SF3Q9HD45 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
TM9SF3Q9HD45 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TM9SF3Q9HD45 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
TM9SF3Q9HD45 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC20.49■□□□□ 0.87
TM9SF3Q9HD45 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
TM9SF3Q9HD45 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TM9SF3Q9HD45 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.49■□□□□ 0.87
TM9SF3Q9HD45 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
TM9SF3Q9HD45 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC20.49■□□□□ 0.87
TM9SF3Q9HD45 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
TM9SF3Q9HD45 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC20.49■□□□□ 0.87
TM9SF3Q9HD45 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
TM9SF3Q9HD45 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
TM9SF3Q9HD45 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC20.49■□□□□ 0.87
TM9SF3Q9HD45 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC20.49■□□□□ 0.87
TM9SF3Q9HD45 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TM9SF3Q9HD45 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC20.49■□□□□ 0.87
TM9SF3Q9HD45 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC20.49■□□□□ 0.87
TM9SF3Q9HD45 USP36-216ENST00000589424 970 ntTSL 5 BASIC20.49■□□□□ 0.87
TM9SF3Q9HD45 AL359736.2-201ENST00000621992 437 ntBASIC20.49■□□□□ 0.87
TM9SF3Q9HD45 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
TM9SF3Q9HD45 AC092368.3-202ENST00000574180 1591 ntBASIC20.49■□□□□ 0.87
TM9SF3Q9HD45 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.49■□□□□ 0.87
TM9SF3Q9HD45 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC20.49■□□□□ 0.87
TM9SF3Q9HD45 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TM9SF3Q9HD45 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC20.48■□□□□ 0.87
TM9SF3Q9HD45 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TM9SF3Q9HD45 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC20.48■□□□□ 0.87
TM9SF3Q9HD45 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
TM9SF3Q9HD45 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TM9SF3Q9HD45 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
TM9SF3Q9HD45 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TM9SF3Q9HD45 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC20.48■□□□□ 0.87
TM9SF3Q9HD45 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC20.48■□□□□ 0.87
TM9SF3Q9HD45 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TM9SF3Q9HD45 RHOD-202ENST00000532559 538 ntTSL 3 BASIC20.48■□□□□ 0.87
TM9SF3Q9HD45 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC20.48■□□□□ 0.87
TM9SF3Q9HD45 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.48■□□□□ 0.87
TM9SF3Q9HD45 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TM9SF3Q9HD45 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
TM9SF3Q9HD45 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC20.48■□□□□ 0.87
TM9SF3Q9HD45 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TM9SF3Q9HD45 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TM9SF3Q9HD45 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC20.47■□□□□ 0.87
TM9SF3Q9HD45 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TM9SF3Q9HD45 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC20.47■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms