Protein–RNA interactions for Protein: Q96DI7

SNRNP40, U5 small nuclear ribonucleoprotein 40 kDa protein, humanhuman

Known RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40Q96DI7 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC18.54■□□□□ 0.56
SNRNP40Q96DI7 MIR4785-201ENST00000585005 73 ntBASIC18.54■□□□□ 0.56
SNRNP40Q96DI7 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SNRNP40Q96DI7 AC006557.6-201ENST00000623071 864 ntBASIC18.54■□□□□ 0.56
SNRNP40Q96DI7 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
SNRNP40Q96DI7 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC18.54■□□□□ 0.56
SNRNP40Q96DI7 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SNRNP40Q96DI7 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SNRNP40Q96DI7 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SNRNP40Q96DI7 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC18.54■□□□□ 0.56
SNRNP40Q96DI7 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SNRNP40Q96DI7 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC18.53■□□□□ 0.56
SNRNP40Q96DI7 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SNRNP40Q96DI7 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC18.53■□□□□ 0.56
SNRNP40Q96DI7 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC18.53■□□□□ 0.56
SNRNP40Q96DI7 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
SNRNP40Q96DI7 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SNRNP40Q96DI7 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
SNRNP40Q96DI7 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SNRNP40Q96DI7 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
SNRNP40Q96DI7 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
SNRNP40Q96DI7 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SNRNP40Q96DI7 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
SNRNP40Q96DI7 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC18.53■□□□□ 0.56
SNRNP40Q96DI7 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC18.53■□□□□ 0.56
SNRNP40Q96DI7 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SNRNP40Q96DI7 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SNRNP40Q96DI7 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
SNRNP40Q96DI7 AC005829.2-201ENST00000571422 1056 ntBASIC18.53■□□□□ 0.56
SNRNP40Q96DI7 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
SNRNP40Q96DI7 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC18.53■□□□□ 0.56
SNRNP40Q96DI7 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC18.53■□□□□ 0.56
SNRNP40Q96DI7 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC18.53■□□□□ 0.56
SNRNP40Q96DI7 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SNRNP40Q96DI7 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
SNRNP40Q96DI7 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
SNRNP40Q96DI7 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SNRNP40Q96DI7 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SNRNP40Q96DI7 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SNRNP40Q96DI7 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC18.52■□□□□ 0.56
SNRNP40Q96DI7 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SNRNP40Q96DI7 KRASP1-201ENST00000407852 552 ntBASIC18.52■□□□□ 0.56
SNRNP40Q96DI7 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SNRNP40Q96DI7 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SNRNP40Q96DI7 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC18.52■□□□□ 0.56
SNRNP40Q96DI7 TSPY15P-201ENST00000457163 923 ntBASIC18.52■□□□□ 0.56
SNRNP40Q96DI7 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SNRNP40Q96DI7 SERP1-205ENST00000487153 657 ntTSL 4 BASIC18.52■□□□□ 0.56
SNRNP40Q96DI7 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC18.52■□□□□ 0.56
SNRNP40Q96DI7 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC18.52■□□□□ 0.56
SNRNP40Q96DI7 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC18.52■□□□□ 0.56
SNRNP40Q96DI7 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC18.52■□□□□ 0.56
SNRNP40Q96DI7 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC18.52■□□□□ 0.56
SNRNP40Q96DI7 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SNRNP40Q96DI7 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC18.52■□□□□ 0.56
SNRNP40Q96DI7 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SNRNP40Q96DI7 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SNRNP40Q96DI7 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
SNRNP40Q96DI7 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
SNRNP40Q96DI7 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
SNRNP40Q96DI7 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
SNRNP40Q96DI7 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
SNRNP40Q96DI7 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC18.51■□□□□ 0.55
SNRNP40Q96DI7 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SNRNP40Q96DI7 AC087633.2-202ENST00000565166 1439 ntBASIC18.51■□□□□ 0.55
SNRNP40Q96DI7 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC18.51■□□□□ 0.55
SNRNP40Q96DI7 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC18.51■□□□□ 0.55
SNRNP40Q96DI7 AC127496.7-201ENST00000625110 1798 ntBASIC18.51■□□□□ 0.55
SNRNP40Q96DI7 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC18.51■□□□□ 0.55
SNRNP40Q96DI7 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SNRNP40Q96DI7 AC087499.1-201ENST00000418141 1075 ntBASIC18.51■□□□□ 0.55
SNRNP40Q96DI7 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SNRNP40Q96DI7 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC18.51■□□□□ 0.55
SNRNP40Q96DI7 BRWD1-AS2-201ENST00000603064 1028 ntBASIC18.51■□□□□ 0.55
SNRNP40Q96DI7 AC113410.3-201ENST00000623366 203 ntBASIC18.51■□□□□ 0.55
SNRNP40Q96DI7 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SNRNP40Q96DI7 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC18.5■□□□□ 0.55
SNRNP40Q96DI7 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SNRNP40Q96DI7 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
SNRNP40Q96DI7 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
SNRNP40Q96DI7 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
SNRNP40Q96DI7 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC18.5■□□□□ 0.55
SNRNP40Q96DI7 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
SNRNP40Q96DI7 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
SNRNP40Q96DI7 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SNRNP40Q96DI7 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC18.5■□□□□ 0.55
SNRNP40Q96DI7 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SNRNP40Q96DI7 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC18.5■□□□□ 0.55
SNRNP40Q96DI7 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SNRNP40Q96DI7 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC18.5■□□□□ 0.55
SNRNP40Q96DI7 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
SNRNP40Q96DI7 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC18.49■□□□□ 0.55
SNRNP40Q96DI7 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SNRNP40Q96DI7 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SNRNP40Q96DI7 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
SNRNP40Q96DI7 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC18.49■□□□□ 0.55
SNRNP40Q96DI7 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SNRNP40Q96DI7 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SNRNP40Q96DI7 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SNRNP40Q96DI7 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms